Co-expression analysis

Gene ID	Ta.30507.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g35230: unknown protein (HF=2e+0)
Module size	6 genes
NF	0.81
%ile	97.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.94	Ta.30507.1.S1_at	CK214499	-	-	2e+0	At5g35230	unknown protein	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.93	Ta.4678.1.S1_at	CD935984	WRKY8 transcription factor	-	3e+0	At5g07100	WRKY26	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.93	Ta.4678.1.S1_x_at	CD935984	WRKY8 transcription factor	-	3e+0	At5g07100	WRKY26	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.94	Ta.30507.2.S1_x_at	BJ321266	-	-	4e+0	At4g03600	unknown protein	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.92	Ta.103.1.S1_at	D16416.1	zinc-finger protein WZF1	-	6e-1	At2g44840	ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)	O.I.	H.G.	S.X.	Please select
0.61	82.0	0.93	Ta.24601.1.S1_at	BQ483742	-	-	1e+0	At1g49400	emb1129 (embryo defective 1129)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.0	99.3	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
8.0	98.8	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.3	98.6	GSM143523	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
7.3	98.6	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.1	98.5	GSM138154	genotype H5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
6.4	98.2	GSM139933	Anther mature anthers rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.4	96.8	GSM138145	Genotype RL4452 developing seed at 5 days after anthesis, biological rep3 location SB	GSE5937	Wheat expression level polymorphism study parental genotypes 2 biological reps from SB location
4.2	96.6	GSM138188	genotype F38a developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.0	96.3	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.6	95.6	GSM138200	genotype F48 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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