Co-expression analysis

Gene ID	Ta.30507.1.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At5g35230: unknown protein (HF=2e+0)
Module size	27 genes
NF	0.53
%ile	79.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	92.2	0.85	Ta.30507.1.S1_a_at	CK214499	-	-	2e+0	At5g35230	unknown protein	O.I.	H.G.	S.X.	Please select
0.68	86.5	0.91	Ta.13803.1.S1_x_at	CA498188	-	-	3e-2	At1g73630	calcium-binding protein, putative	O.I.	H.G.	S.X.	Please select
0.65	83.9	0.91	TaAffx.98004.1.S1_at	BQ801268	-	-	1e+0	At5g28610	-	O.I.	H.G.	S.X.	Please select
0.64	83.6	0.91	Ta.7991.3.S1_at	CA705300	-	-	8e-1	At3g17980	C2 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.64	83.6	0.91	Ta.29444.2.S1_a_at	CA684925	-	-	4e-2	At3g55050	serine/threonine protein phosphatase 2C (PP2C6)	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.90	Ta.13803.3.S1_x_at	AL830288	-	-	2e+0	At2g29920	unknown protein	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.91	TaAffx.17013.2.S1_x_at	CA730181	-	-	1e+0	At4g10250	ATHSP22.0	O.I.	H.G.	S.X.	Please select
0.62	82.3	0.90	Ta.24601.1.S1_at	BQ483742	-	-	1e+0	At1g49400	emb1129 (embryo defective 1129)	O.I.	H.G.	S.X.	Please select
0.59	79.8	0.90	Ta.4736.1.A1_at	BJ275856	-	-	6e+0	At1g54230	DNA binding	O.I.	H.G.	S.X.	Please select
0.59	79.8	0.89	Ta.7568.1.S1_x_at	BJ276089	-	-	4e-1	At5g37780	CAM1 (CALMODULIN 1)	O.I.	H.G.	S.X.	Please select
0.59	79.8	0.89	Ta.30507.1.S1_at	CK214499	-	-	2e+0	At5g35230	unknown protein	O.I.	H.G.	S.X.	Please select
0.59	79.8	0.90	Ta.11100.1.S1_at	BJ272744	-	-	3e-2	At5g06660	unknown protein	O.I.	H.G.	S.X.	Please select
0.59	79.8	0.91	Ta.7991.3.S1_x_at	CA705300	-	-	8e-1	At3g17980	C2 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.92	Ta.29444.2.S1_s_at	CA684925	-	-	4e-2	At3g55050	serine/threonine protein phosphatase 2C (PP2C6)	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.89	Ta.30507.2.S1_x_at	BJ321266	-	-	4e+0	At4g03600	unknown protein	O.I.	H.G.	S.X.	Please select
0.54	75.5	0.90	TaAffx.43678.1.S1_x_at	BF200239	-	-	9e+0	At2g40100	LHCB4.3 (light harvesting complex PSII)	O.I.	H.G.	S.X.	Please select
0.54	75.5	0.90	Ta.4674.1.S1_x_at	BJ269896	-	-	2e+0	At4g27140	2S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.91	TaAffx.48658.1.S1_x_at	BJ318495	-	-	2e+0	At5g17900	-	O.I.	H.G.	S.X.	Please select
0.52	73.7	0.91	Ta.9160.2.S1_a_at	CA729641	-	-	7e-2	At1g10280	unknown protein	O.I.	H.G.	S.X.	Please select
0.48	69.0	0.92	Ta.13966.2.S1_s_at	CK198271	-	-	2e-1	At5g09750	HEC3 (HECATE 3)	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.89	Ta.4674.1.S1_s_at	BJ269896	-	-	2e+0	At4g27140	2S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.91	Ta.16082.2.S1_at	CK211295	-	-	2e+0	At2g32100	OFP16 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.91	Ta.22757.1.S1_s_at	CK211700	-	-	1e-4	At1g11700	unknown protein	O.I.	H.G.	S.X.	Please select
0.42	60.9	0.88	Ta.7568.3.S1_x_at	CA594090	-	-	3e-1	At5g37780	CAM1 (CALMODULIN 1)	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.90	Ta.4911.1.S1_a_at	CD923630	-	-	1e+0	At2g15345	enzyme inhibitor/ pectinesterase	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.90	Ta.29358.1.A1_at	BJ321494	-	-	2e-6	At3g18040	MPK9 (MAP KINASE 9)	O.I.	H.G.	S.X.	Please select
0.28	39.2	0.89	Ta.6752.2.S1_a_at	CA725489	-	-	3e+0	At4g00270	DNA-binding storekeeper protein-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.3	98.6	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
5.4	97.7	GSM143523	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.2	97.5	GSM138154	genotype H5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.4	96.8	GSM143508	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.2	96.6	GSM143521	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.1	96.4	GSM138188	genotype F38a developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.0	96.3	GSM143509	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.8	96.0	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.8	96.0	GSM138162	genotype E5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.5	95.4	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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