Co-expression analysis

Gene ID	Ta.30416.2.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At2g18700: ATTPS11 (HF=7e-11)
Module size	6 genes
NF	0.01
%ile	4.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.89	Ta.30416.2.S1_a_at	CA651932	-	-	7e-11	At2g18700	ATTPS11	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.95	Ta.3478.3.S1_x_at	CA637826	-	-	2e-11	At1g69670	CUL3B (CULLIN 3B)	O.I.	H.G.	S.X.	Please select
0.13	14.6	0.95	TaAffx.56155.1.S1_at	CA656564	-	-	1e+1	At5g26070	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.09	10.4	0.93	TaAffx.105846.1.S1_at	CA729040	-	-	1e+0	At3g43630	nodulin, putative	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.95	TaAffx.38158.4.S1_x_at	CA630021	-	-	1e-3	At2g44330	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
-	0.7	0.93	Ta.12999.1.S1_at	BQ281770	-	-	2e+0	At4g37970	CAD6 (CINNAMYL ALCOHOL DEHYDROGENASE 6)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.6	97.0	GSM143520	Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.1	96.4	GSM111179	genotype DH95 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.9	96.1	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.8	96.0	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.8	96.0	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.8	96.0	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.7	95.8	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.6	95.6	GSM138161	genotype A91 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.4	95.2	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.3	95.0	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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