Co-expression analysis

Gene ID Ta.30410.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At2g01180: ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1) (HF=1e-10)
Module size 6 genes
NF 0.11
%ile 23.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.94Ta.30410.1.A1_atCK209142--1e-10At2g01180ATPAP1 (PHOSPHATIDIC ACID PHOSPHATASE 1)O.I.H.G.S.X.
0.3142.70.94Ta.8717.1.S1_a_atBG904854--3e-1At4g38230CPK26O.I.H.G.S.X.
0.2329.00.94Ta.6147.1.S1_x_atBQ619937--7e-7At1g15080LPP2 (LIPID PHOSPHATE PHOSPHATASE 2)O.I.H.G.S.X.
0.1314.60.94Ta.16999.1.S1_x_atCA648819--8e-6At1g14290SBH2 (SPHINGOID BASE HYDROXYLASE 2)O.I.H.G.S.X.
0.1314.60.95Ta.18914.1.A1_a_atCD875211--2e-1At2g18915LKP2 (LOV KELCH PROTEIN 2)O.I.H.G.S.X.
0.045.80.94Ta.3443.2.S1_x_atBJ207862--3e+0At1g15580IAA5 (INDOLE-3-ACETIC ACID INDUCIBLE 5)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.499.7GSM314284tissue type: 22 DAP embryo - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
20.099.7GSM314285tissue type: 22 DAP embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
18.199.7GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.896.0GSM298078Leaf tissue of Solstice at 3 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.695.6GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.994.0GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.893.6GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.793.3GSM143524Thatcher_Lr34 (susceptible), mock inoculated distal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
2.793.3GSM250918TcLr34_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
2.793.3GSM143507Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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