Co-expression analysis

Gene ID Ta.3.1.S1_at
Gene name beta-amylase
Homology with ArabidopsisSimilar to At4g15210: BAM5 (BETA-AMYLASE 5) (HF=3e-7)
Module size 15 genes
NF 0.76
%ile 95.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.30.97Ta.3.1.S1_atBJ265463beta-amylase-3e-7At4g15210BAM5 (BETA-AMYLASE 5)O.I.H.G.S.X.
0.8593.80.98Ta.8258.3.S1_atCN012816--1e+0At3g63095-O.I.H.G.S.X.
0.8493.60.98Ta.27766.2.S1_atCD896218fasciclin-like protein FLA6-1e+1At3g21150zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.8493.60.98Ta.10042.1.S1_atCK205237--2e-4At4g28780GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.8192.40.98Ta.21020.1.S1_atCD895774--3e+0At3g57710protein kinase family proteinO.I.H.G.S.X.
0.7589.80.98Ta.30755.1.S1_atCN007962--1e+0At3g09750unknown proteinO.I.H.G.S.X.
0.7489.40.98Ta.5103.1.S1_atBJ271759--1e-3At4g38680GRP2 (GLYCINE RICH PROTEIN 2)O.I.H.G.S.X.
0.7489.40.98Ta.11619.1.A1_atCN011986--2e+1At3g28958plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.7389.10.97Ta.8258.1.S1_x_atCN011845--1e+0At3g63095-O.I.H.G.S.X.
0.7288.30.99Ta.8258.2.S1_atBJ233335--1e+0At3g63095-O.I.H.G.S.X.
0.7188.00.97Ta.11582.1.S1_atCD937420--5e-7At1g18650PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3)O.I.H.G.S.X.
0.7087.20.98Ta.10068.1.S1_atAL830062--8e-2At3g07510unknown proteinO.I.H.G.S.X.
0.6786.30.98Ta.20930.1.S1_atCA630387--1e+0At5g37780CAM1 (CALMODULIN 1)O.I.H.G.S.X.
0.6583.90.98Ta.22816.1.S1_x_atCD885331type 2 non-specific lipid transfer protein precursor-4e+0At1g24510T-complex protein 1 epsilon subunit, putative / TCP-1-epsilon, putative / chaperonin, putativeO.I.H.G.S.X.
0.6383.10.98Ta.29445.1.S1_atCK212497--3e+0At3g48660unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.399.3GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
9.699.1GSM139930Anther immature pollen rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
8.698.9GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
8.398.8GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
6.598.3GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.797.9GSM314285tissue type: 22 DAP embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.697.8GSM314284tissue type: 22 DAP embryo - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.497.7GSM314286tissue type: 22 DAP embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.897.2GSM139926Anther tetrads rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.695.6GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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