| Gene ID | Ta.29930.1.S1_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At5g60500: undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein (HF=5e+0) |
| Module size | 6 genes |
| NF | 0.49 |
| %ile | 75.0 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 98.2 | 0.92 | Ta.29930.1.S1_at | BJ273225 | - | - | 5e+0 | At5g60500 | undecaprenyl pyrophosphate synthetase family protein / UPP synthetase family protein | O.I. | H.G. | S.X. | |
| 0.73 | 89.1 | 0.93 | TaAffx.129081.2.S1_s_at | CA608630 | - | - | 2e-2 | At4g32714 | SCRL25 (SCR-Like 25) | O.I. | H.G. | S.X. | |
| 0.44 | 64.5 | 0.92 | Ta.424.1.S1_at | CA644335 | - | - | 5e+0 | At4g02370 | unknown protein | O.I. | H.G. | S.X. | |
| 0.43 | 62.2 | 0.92 | TaAffx.71016.1.A1_at | BE424472 | - | - | 1e+0 | At3g22930 | calmodulin, putative | O.I. | H.G. | S.X. | |
| 0.33 | 46.9 | 0.92 | TaAffx.43678.1.S1_x_at | BF200239 | - | - | 9e+0 | At2g40100 | LHCB4.3 (light harvesting complex PSII) | O.I. | H.G. | S.X. | |
| 0.26 | 33.6 | 0.92 | Ta.16082.2.S1_at | CK211295 | - | - | 2e+0 | At2g32100 | OFP16 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 16) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 10.6 | 99.2 | GSM298067 | Leaf tissue of Paragon at 5 weeks post germination, biological rep 1 | GSE11774 | Expression data from cold treated wheat cultivars | |
| 8.1 | 98.8 | GSM250895 | Tc_3dpi_mock_rep3 | GSE9915 | Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat | |
| 6.6 | 98.3 | GSM250900 | TcLr34_3dpi_inoculated_rep3 | GSE9915 | Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat | |
| 5.7 | 97.9 | GSM250898 | TcLr1_3dpi_inoculated_rep3 | GSE9915 | Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat | |
| 4.6 | 97.0 | GSM250899 | TcLr34_3dpi_mock_rep3 | GSE9915 | Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat | |
| 4.5 | 96.9 | GSM250897 | TcLr1_3dpi_mock_rep3 | GSE9915 | Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat | |
| 4.4 | 96.8 | GSM298070 | Leaf tissue of Paragon at 9 weeks post germination, biological rep 2 | GSE11774 | Expression data from cold treated wheat cultivars | |
| 4.2 | 96.6 | GSM298092 | Crown tissue of Solstice at 3 weeks post germination | GSE11774 | Expression data from cold treated wheat cultivars | |
| 3.8 | 96.0 | GSM250896 | Tc_3dpi_inoculated_rep3 | GSE9915 | Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat | |
| 3.1 | 94.5 | GSM143523 | Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 3 | GSE6227 | Expression data from rust or mock inoculated, fully expanded flag leaf halves | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.57 | 79.8 | 1613679_at | At5g60500 | - | - | 7e-5 | At5g61210 | SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33) | O.I. | H.G. | S.X. | |
| 0.57 | 79.8 | 1618075_at | At5g60500 | hypothetical protein LOC100249271 | - | 1e+0 | At5g40500 | unknown protein | O.I. | H.G. | S.X. | |
| 0.40 | 57.7 | 1609188_at | At5g60500 | hypothetical protein LOC100267424 | - | 2e-11 | At5g54490 | PBP1 (PINOID-BINDING PROTEIN 1) | O.I. | H.G. | S.X. | |
| 0.31 | 41.3 | 1613407_at | At5g60500 | - | - | 1e+0 | At3g57280 | unknown protein | O.I. | H.G. | S.X. | |
| 0.31 | 41.3 | 1613096_at | At5g60500 | hypothetical protein LOC100246707 | - | 9e-14 | At3g55980 | SZF1 (SALT-INDUCIBLE ZINC FINGER 1) | O.I. | H.G. | S.X. | |
| 0.29 | 37.7 | 1611432_at | At5g60500 | hypothetical protein LOC100265313 | - | 3e-5 | At5g54490 | PBP1 (PINOID-BINDING PROTEIN 1) | O.I. | H.G. | S.X. | |
| 0.17 | 18.2 | 1620072_s_at | At5g60500 | similar to Os01g0238200 | - | 5e+0 | At5g52870 | unknown protein | O.I. | H.G. | S.X. | |
| 0.07 | 7.8 | 1616198_at | At5g60500 | hypothetical protein LOC100242144 | - | 1e-7 | At1g28370 | ERF11 (ERF DOMAIN PROTEIN 11) | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Oryza_sativa |
| Populus_trichocarpa |
| Zea_mays |
Back to the CoP portal site
Back to the KAGIANA project homepage