Co-expression analysis

Gene ID Ta.2985.3.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At4g18060: clathrin binding (HF=8e-4)
Module size 14 genes
NF 0.18
%ile 32.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5979.80.90Ta.2985.3.S1_x_atCA696412--8e-4At4g18060clathrin bindingO.I.H.G.S.X.
0.3651.90.92Ta.2985.2.S1_atBJ244836--1e-3At4g18060clathrin bindingO.I.H.G.S.X.
0.3549.80.92TaAffx.84817.1.S1_atCA628786--2e+0At5g38700unknown proteinO.I.H.G.S.X.
0.2633.60.93Ta.3894.2.S1_s_atCA694306--5e+0At5g64180unknown proteinO.I.H.G.S.X.
0.2329.00.93Ta.28173.1.A1_s_atCA648951--4e+0At5g28450chlorophyll A-B binding protein, chloroplast, putative / LHCI type II CAB, putativeO.I.H.G.S.X.
0.2024.00.94Ta.29456.1.S1_x_atCA683816--3e-18At1g77810galactosyltransferase family proteinO.I.H.G.S.X.
0.2024.00.92Ta.4194.2.S1_atBJ260558--2e-1At2g40070-O.I.H.G.S.X.
0.1719.80.94Ta.2985.2.S1_a_atBJ244836--1e-3At4g18060clathrin bindingO.I.H.G.S.X.
0.1618.20.94Ta.7508.2.S1_a_atCA611149--4e+0At5g36900unknown proteinO.I.H.G.S.X.
0.1415.80.91TaAffx.106349.1.S1_atCA723811--1e+0At1g67080ABA4 (abscisic acid (ABA)-deficient 4)O.I.H.G.S.X.
0.1415.80.94Ta.11290.1.A1_atBQ169786--2e+1At5g55870unknown proteinO.I.H.G.S.X.
0.1213.30.94Ta.9640.2.S1_s_atCA615695--5e-1At1g48780unknown proteinO.I.H.G.S.X.
0.1112.40.95TaAffx.116089.1.S1_atCF133348--3e-5At3g19590WD-40 repeat family protein / mitotic checkpoint protein, putativeO.I.H.G.S.X.
0.089.40.92Ta.25614.2.S1_a_atCK162412--5e+0At5g30341unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.097.4GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.097.4GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.897.2GSM298094Crown tissue of Solstice at 9 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.897.2GSM298064Crown tissue of Harnesk at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.797.1GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.697.0GSM314270tissue type: immature inflorescence - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.697.0GSM298087Crown tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.496.8GSM298073Crown tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.396.7GSM298088Crown tissue of Solstice at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.296.6GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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