Co-expression analysis

Gene ID Ta.29525.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g79390: unknown protein (HF=2e-3)
Module size 10 genes
NF 0.36
%ile 58.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6383.10.98Ta.29525.1.S1_atCA691279--2e-3At1g79390unknown proteinO.I.H.G.S.X.
0.5779.20.98Ta.7380.1.A1_atCK163448--1e-3At5g40280ERA1 (ENHANCED RESPONSE TO ABA 1)O.I.H.G.S.X.
0.4666.80.98Ta.25019.1.S1_atBT009274.1--9e-5At2g23350PAB4 (POLY(A) BINDING PROTEIN 4)O.I.H.G.S.X.
0.3854.70.98Ta.12265.1.A1_a_atBJ310085--9e-2At1g11820catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compoundsO.I.H.G.S.X.
0.3549.80.98Ta.27272.1.S1_atBT009414.1--3e-10At3g58560endonuclease/exonuclease/phosphatase family proteinO.I.H.G.S.X.
0.3448.10.98Ta.14349.1.S1_x_atCK161301--9e-26At1g4500026S proteasome regulatory complex subunit p42D, putativeO.I.H.G.S.X.
0.3244.40.98Ta.7156.1.S1_atCK166080--4e+0At1g31240DNA bindingO.I.H.G.S.X.
0.3244.40.98Ta.7043.1.A1_atCB307359--2e+0At3g59470far-red impaired responsive family protein / FAR1 family proteinO.I.H.G.S.X.
0.2939.20.98Ta.2706.3.S1_atCK205780--2e-15At1g79920ATP bindingO.I.H.G.S.X.
0.2329.00.98Ta.1714.1.A1_atCK171428--3e-2At4g39190unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.798.4GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.998.0GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.998.0GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.597.8GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.997.3GSM139932Anther mature anthers rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.596.9GSM139933Anther mature anthers rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.495.2GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.294.8GSM139925Anther tetrads rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.194.5GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.094.3GSM324491Si+ B- rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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