Co-expression analysis

Gene ID Ta.29524.2.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At5g60970: TCP5 (TEOSINTE BRANCHED1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 5) (HF=4e+0)
Module size 7 genes
NF 0.24
%ile 39.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5576.80.95Ta.29524.2.S1_a_atCA687834--4e+0At5g60970TCP5 (TEOSINTE BRANCHED1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 5)O.I.H.G.S.X.
0.2839.20.96TaAffx.25253.1.S1_x_atCA703774--9e+0At5g10260AtRABH1e (Arabidopsis Rab GTPase homolog H1e)O.I.H.G.S.X.
0.2227.10.96Ta.3036.3.S1_a_atCA656850--2e-1At5g46020unknown proteinO.I.H.G.S.X.
0.2125.50.95TaAffx.129143.2.S1_atCA733902--7e-8At4g10790UBX domain-containing proteinO.I.H.G.S.X.
0.1922.40.96Ta.28250.2.S1_atCA681798--1e+0At3g12490cysteine protease inhibitor, putative / cystatin, putativeO.I.H.G.S.X.
0.1922.40.96Ta.7282.2.S1_x_atCA725369--3e+0At4g39260GR-RBP8O.I.H.G.S.X.
0.1821.00.96Ta.7282.2.S1_a_atCA725369--3e+0At4g39260GR-RBP8O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.097.4GSM138193genotype B33 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
4.396.7GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.294.8GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.194.5GSM138205genotype H8 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
2.994.0GSM111187genotype B68 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
2.893.6GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
2.793.3GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
2.692.9GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
2.592.5GSM111197genotype J15 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
2.592.5GSM138171genotype C31 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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