Co-expression analysis

Gene ID Ta.29512.2.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At1g36095: - (HF=3e-1)
Module size 7 genes
NF 0.74
%ile 95.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5576.80.93Ta.29512.2.S1_x_atCA741393--3e-1At1g36095-O.I.H.G.S.X.
0.8694.10.93Ta.28276.2.S1_atAJ613933--2e+0At4g29460phospholipase A2 gamma, secretory low molecular weightO.I.H.G.S.X.
0.8694.10.93Ta.28276.1.S1_a_atBQ162680--5e-1At4g29460phospholipase A2 gamma, secretory low molecular weightO.I.H.G.S.X.
0.8393.40.94Ta.28276.2.S1_x_atAJ613933--2e+0At1g29000heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.7790.80.94Ta.28276.1.S1_x_atBQ162680--8e+0At2g35850unknown proteinO.I.H.G.S.X.
0.6786.30.94Ta.4189.1.S1_atCK154928--1e-6At5g14480glycosyl transferase family 17 proteinO.I.H.G.S.X.
0.5072.40.94Ta.4189.2.S1_a_atCA626707--3e-1At1g12990glycosyl transferase family 17 proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.698.7GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
7.698.7GSM250914Tc_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.198.1GSM250908Tc_7dpi_inoculated_rep2GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.797.9GSM250902Tc_7dpi_inoculated_rep1GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.497.7GSM143508Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
4.396.7GSM143509Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
4.096.3GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.996.1GSM143523Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.896.0GSM298090Leaf tissue of Solstice at 5 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.896.0GSM143521Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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