Co-expression analysis

Gene ID	Ta.29512.2.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At1g36095: - (HF=3e-1)
Module size	7 genes
NF	0.74
%ile	95.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	76.8	0.93	Ta.29512.2.S1_x_at	CA741393	-	-	3e-1	At1g36095	-	O.I.	H.G.	S.X.	Please select
0.86	94.1	0.93	Ta.28276.2.S1_at	AJ613933	-	-	2e+0	At4g29460	phospholipase A2 gamma, secretory low molecular weight	O.I.	H.G.	S.X.	Please select
0.86	94.1	0.93	Ta.28276.1.S1_a_at	BQ162680	-	-	5e-1	At4g29460	phospholipase A2 gamma, secretory low molecular weight	O.I.	H.G.	S.X.	Please select
0.83	93.4	0.94	Ta.28276.2.S1_x_at	AJ613933	-	-	2e+0	At1g29000	heavy-metal-associated domain-containing protein	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.94	Ta.28276.1.S1_x_at	BQ162680	-	-	8e+0	At2g35850	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.94	Ta.4189.1.S1_at	CK154928	-	-	1e-6	At5g14480	glycosyl transferase family 17 protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.94	Ta.4189.2.S1_a_at	CA626707	-	-	3e-1	At1g12990	glycosyl transferase family 17 protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.6	98.7	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
7.6	98.7	GSM250914	Tc_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
6.1	98.1	GSM250908	Tc_7dpi_inoculated_rep2	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.7	97.9	GSM250902	Tc_7dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.4	97.7	GSM143508	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.3	96.7	GSM143509	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.0	96.3	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.9	96.1	GSM143523	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
3.8	96.0	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.8	96.0	GSM143521	Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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