Co-expression analysis

Gene ID Ta.29497.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g31940: unknown protein (HF=2e+0)
Module size 16 genes
NF 0.32
%ile 52.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6383.10.95Ta.29497.1.S1_atCK194386--2e+0At1g31940unknown proteinO.I.H.G.S.X.
0.5273.70.97Ta.28428.1.A1_atCD916734--5e+0At3g17240mtLPD2 (LIPOAMIDE DEHYDROGENASE 2)O.I.H.G.S.X.
0.5072.40.97Ta.3950.1.A1_atCD374053--1e-1At3g23280zinc finger (C3HC4-type RING finger) family protein / ankyrin repeat family proteinO.I.H.G.S.X.
0.4058.40.96TaAffx.76633.1.S1_atCK162934--8e-10At3g02290zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.3956.10.96TaAffx.29873.1.S1_atCA633751--3e+0Atmg00760-O.I.H.G.S.X.
0.3549.80.97Ta.29331.1.S1_a_atCK168067FD-like 6 protein-3e-16At2g41070EEL (ENHANCED EM LEVEL)O.I.H.G.S.X.
0.3549.80.97Ta.9207.1.S1_atCK212610--1e-8At1g79590SYP52 (SYNTAXIN OF PLANTS 52)O.I.H.G.S.X.
0.3244.40.96TaAffx.55278.1.S1_x_atCA668780Plasma membrane H+-ATPase-4e+0At5g27238-O.I.H.G.S.X.
0.3142.70.96Ta.27928.1.S1_atCD897790--2e+1At3g52510-O.I.H.G.S.X.
0.2839.20.97Ta.9297.1.S1_atBJ321859--2e+0At2g07669unknown proteinO.I.H.G.S.X.
0.2633.60.97Ta.7444.1.A1_atBJ320657--4e+0At3g61900auxin-responsive family proteinO.I.H.G.S.X.
0.2633.60.97Ta.5958.1.S1_atBT008977.1--3e-3At5g21090leucine-rich repeat protein, putativeO.I.H.G.S.X.
0.1922.40.97Ta.24358.1.S1_s_atCA611190--3e+0At1g224102-dehydro-3-deoxyphosphoheptonate aldolase, putative / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, putative / DAHP synthetase, putativeO.I.H.G.S.X.
0.1719.80.96Ta.9591.2.S1_x_atCA688256--8e-1At3g10300calcium-binding EF hand family proteinO.I.H.G.S.X.
0.1719.80.96Ta.30793.1.S1_x_atCK212652--1e-4At5g46030unknown proteinO.I.H.G.S.X.
0.1618.20.97Ta.4798.1.S1_atCK163023Vacuolar proton ATPase subunit H-2e-8At3g42050vacuolar ATP synthase subunit H family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.999.0GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
8.898.9GSM139932Anther mature anthers rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
7.998.7GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
7.198.5GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
6.698.3GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.897.9GSM314273tissue type: floral bracts, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.297.5GSM139933Anther mature anthers rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.396.7GSM314274tissue type: floral bracts, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.695.6GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.695.6GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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