Co-expression analysis

Gene ID	Ta.29457.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g30020: subtilase family protein (HF=1e-18)
Module size	7 genes
NF	0.28
%ile	45.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.75	89.8	0.96	Ta.29457.1.S1_at	CK205969	-	-	1e-18	At4g30020	subtilase family protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.96	Ta.9117.1.A1_a_at	BJ216810	-	-	2e+0	At1g51010	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.97	Ta.30565.2.S1_s_at	BJ310870	-	-	2e+0	At5g35520	MIS12 (MINICHROMOSOME INSTABILITY 12 (MIS12)-LIKE)	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.97	Ta.29552.1.S1_x_at	BE446813	-	-	6e-1	At1g18650	PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3)	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.96	Ta.2807.1.A1_s_at	CD886096	-	-	1e+0	At3g06040	ribosomal protein L12 family protein	O.I.	H.G.	S.X.	Please select
0.17	19.8	0.96	Ta.9117.1.A1_at	BJ216810	-	-	2e+0	At1g51010	unknown protein	O.I.	H.G.	S.X.	Please select
0.08	9.4	0.97	Ta.7135.3.A1_a_at	BJ322018	-	-	2e-1	At4g17980	anac071 (Arabidopsis NAC domain containing protein 71)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.6	98.3	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
6.2	98.1	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
6.0	98.0	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
5.2	97.5	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
4.5	96.9	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
4.4	96.8	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.1	96.4	GSM314265	tissue type: seedling, crown - rep3	GSE12508	Transcription patterns during wheat development
3.9	96.1	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.7	95.8	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
3.3	95.0	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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