Co-expression analysis

Gene ID	Ta.2933.2.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At4g04953: unknown protein (HF=7e+0)
Module size	14 genes
NF	0.49
%ile	75.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.62	82.3	0.92	Ta.2933.2.S1_x_at	BQ162297	-	-	7e+0	At4g04953	unknown protein	O.I.	H.G.	S.X.	Please select
0.61	82.0	0.95	Ta.8965.2.S1_x_at	BQ162698	-	-	1e-1	At3g53850	-	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.94	Ta.9391.2.S1_a_at	CA596737	-	-	1e+0	At1g17130	cell cycle control protein-related	O.I.	H.G.	S.X.	Please select
0.54	75.5	0.94	Ta.4052.2.A1_a_at	BJ213636	-	-	1e+0	At1g57610	unknown protein	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.94	Ta.4052.1.A1_a_at	BJ263212	-	-	2e+0	At1g57610	unknown protein	O.I.	H.G.	S.X.	Please select
0.52	73.7	0.95	Ta.25904.1.S1_at	CD454243	-	-	9e-5	At1g22800	methyltransferase	O.I.	H.G.	S.X.	Please select
0.48	69.0	0.96	Ta.4828.1.S1_a_at	BJ272492	-	-	2e-1	At5g66190	FNR1 (FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1)	O.I.	H.G.	S.X.	Please select
0.46	66.8	0.95	Ta.11906.1.S1_at	BQ171036	-	-	4e+0	At5g21274	CAM6 (CALMODULIN 6)	O.I.	H.G.	S.X.	Please select
0.45	65.2	0.95	Ta.484.1.S1_at	BJ322416	-	-	3e+0	At5g54150	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.95	Ta.8872.1.S1_at	BQ162544	-	-	5e+0	At3g14760	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.95	Ta.986.2.A1_at	CK205584	-	-	7e+0	At3g55770	LIM domain-containing protein	O.I.	H.G.	S.X.	Please select
0.41	59.6	0.94	Ta.8965.1.S1_at	BJ319766	-	-	2e+0	At1g68490	unknown protein	O.I.	H.G.	S.X.	Please select
0.39	56.1	0.95	Ta.11620.1.S1_at	BQ170468	-	-	6e+0	At2g45150	phosphatidate cytidylyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.94	Ta.4828.3.S1_a_at	BJ267543	-	-	3e-1	At5g04800	40S ribosomal protein S17 (RPS17D)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
15.8	99.6	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
15.5	99.6	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
13.6	99.5	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
13.3	99.5	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
9.9	99.1	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
9.2	99.0	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
8.6	98.9	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
8.3	98.8	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.4	98.6	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.0	96.3	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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