Co-expression analysis

Gene ID Ta.2933.2.S1_a_at
Gene name
Homology with ArabidopsisSimilar to At4g04953: unknown protein (HF=7e+0)
Module size 6 genes
NF 0.15
%ile 28.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4666.80.91Ta.2933.2.S1_a_atBQ162297--7e+0At4g04953unknown proteinO.I.H.G.S.X.
0.5072.40.93Ta.2933.2.S1_x_atBQ162297--7e+0At4g04953unknown proteinO.I.H.G.S.X.
0.2227.10.93TaAffx.133762.1.A1_atBJ306104--1e+0At4g34770auxin-responsive family proteinO.I.H.G.S.X.
0.1821.00.94Ta.4052.1.A1_a_atBJ263212--2e+0At1g57610unknown proteinO.I.H.G.S.X.
0.1618.20.93Ta.4052.2.A1_a_atBJ213636--1e+0At1g57610unknown proteinO.I.H.G.S.X.
0.045.80.92TaAffx.46757.1.A1_atBJ319024--4e+0At5g65158-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.897.2GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.897.2GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.697.0GSM314269tissue type: immature inflorescence - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.596.9GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.496.8GSM314270tissue type: immature inflorescence - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.296.6GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.196.4GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.996.1GSM314271tissue type: immature inflorescence - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.896.0GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.495.2GSM139930Anther immature pollen rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1621147_s_at, orthologous to the query gene, Ta.2933.2.S1_a_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7892.61621147_s_atAt4g04953hypothetical protein LOC100247531-7e-1At5g14530transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.5375.21620494_atAt4g04953--1e+0At5g55190RAN3 (RAN GTPASE 3)O.I.H.G.S.X.
0.5173.21611458_atAt4g04953hypothetical protein LOC100243644-2e-18At2g35530bZIP transcription factor family proteinO.I.H.G.S.X.
0.4666.51608653_atAt4g04953hypothetical protein LOC100263217-5e+0At4g15020DNA binding / protein dimerizationO.I.H.G.S.X.
0.4666.51609110_atAt4g04953hypothetical protein LOC100258605-2e-1At3g28230-O.I.H.G.S.X.
0.4666.51622061_atAt4g04953hypothetical protein LOC100264484-3e-10At1g59820ALA3 (Aminophospholipid ATPase3)O.I.H.G.S.X.
0.4564.61611067_atAt4g04953hypothetical protein LOC100259036-3e-29At2g02470AL6 (ALFIN-LIKE 6)O.I.H.G.S.X.
0.4464.11619282_atAt4g04953hypothetical protein LOC100252267-5e-75At4g21710NRPB2O.I.H.G.S.X.
0.4158.71612962_atAt4g04953--2e-2At5g3553040S ribosomal protein S3 (RPS3C)O.I.H.G.S.X.
0.4158.71607992_atAt4g04953hypothetical protein LOC100246062-1e+0At3g45510zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4158.71622419_atAt4g04953GAGA-binding transcriptional activator BBR/BPC1-like-5e-20At1g14685BPC2 (BASIC PENTACYSTEINE 2)O.I.H.G.S.X.
0.3954.91609498_s_atAt4g04953hypothetical protein LOC100242198-4e+0At5g52270vesicle transport protein-relatedO.I.H.G.S.X.
0.3853.61609711_s_atAt4g04953hypothetical protein LOC100246755-4e-1At2g29590thioesterase family proteinO.I.H.G.S.X.
0.3853.61613700_atAt4g04953hypothetical protein LOC100243012-3e-29At5g23290PDF5 (PREFOLDIN 5)O.I.H.G.S.X.
0.3650.71618986_atAt4g04953similar to Not CCR4-Not complex component, N-terminal; tRNA-binding arm-3e-19At5g18230transcription regulator NOT2/NOT3/NOT5 family proteinO.I.H.G.S.X.
0.3548.51612660_atAt4g04953hypothetical protein LOC100244096-1e-39At1g20960emb1507 (embryo defective 1507)O.I.H.G.S.X.
0.3548.51611640_atAt4g04953hypothetical protein LOC100242037-4e-14At4g24470TIFY1O.I.H.G.S.X.
0.3345.71622063_s_atAt4g04953hypothetical protein LOC100262414-3e-27At4g18040EIF4E (EUKARYOTIC TRANSLATION INITATION FACTOR 4E)O.I.H.G.S.X.
0.3141.31617406_s_atAt4g04953hypothetical protein LOC100266010-2e-8At3g07220transcriptional activator, putativeO.I.H.G.S.X.
0.2734.01620466_atAt4g04953hypothetical protein LOC100246357-7e-27At5g56280CSN6AO.I.H.G.S.X.
0.2734.01621779_s_atAt4g04953hypothetical protein LOC100244148-6e-40At3g52560UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4)O.I.H.G.S.X.
0.2734.01619735_atAt4g04953hypothetical protein LOC100258926-1e-34At2g15430NRPB3O.I.H.G.S.X.
0.2428.71622769_atAt4g04953hypothetical protein LOC100243302-1e-22At1g55520TBP2 (TATA BINDING PROTEIN 2)O.I.H.G.S.X.
0.2327.51613596_atAt4g04953hypothetical protein LOC100261591-3e-29At1g32790RNA-binding protein, putativeO.I.H.G.S.X.
0.2327.51622585_s_atAt4g04953hypothetical protein LOC100252123-6e-1At2g01260unknown proteinO.I.H.G.S.X.
0.2225.61614193_atAt4g04953hypothetical protein LOC100253058-1e+0At4g28130diacylglycerol kinase accessory domain-containing proteinO.I.H.G.S.X.
0.2225.61620460_atAt4g04953hypothetical protein LOC100263447-3e-7At3g54670TTN8 (TITAN8)O.I.H.G.S.X.
0.1920.91619972_atAt4g04953hypothetical protein LOC100263609-2e-1At5g56770unknown proteinO.I.H.G.S.X.
0.1718.21619032_atAt4g04953hypothetical LOC100255424-7e-37At4g27120unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Zea_mays



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