Co-expression analysis

Gene ID Ta.29293.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g54510: DFL1 (DWARF IN LIGHT 1) (HF=4e+0)
Module size 9 genes
NF 0.12
%ile 24.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8994.60.89Ta.29293.1.S1_atCA660172--4e+0At5g54510DFL1 (DWARF IN LIGHT 1)O.I.H.G.S.X.
0.3854.70.95Ta.30626.3.S1_atCA654616--5e-15At1g69740HEMB1O.I.H.G.S.X.
0.3346.90.96Ta.5439.3.S1_atBJ278126--1e+0At5g44610MAP18 (Microtubule-associated Protein 18)O.I.H.G.S.X.
0.2939.20.96TaAffx.111746.1.S1_s_atCA659066--4e+0At5g62750unknown proteinO.I.H.G.S.X.
0.2329.00.96TaAffx.123635.1.S1_atBJ317672--9e-18At1g13270MAP1C (METHIONINE AMINOPEPTIDASE 1B)O.I.H.G.S.X.
0.1719.80.93TaAffx.130174.2.S1_atBJ257228--1e+0At5g62900unknown proteinO.I.H.G.S.X.
0.1618.20.95TaAffx.98284.1.S1_atBF293921--5e-10At5g14260SET domain-containing proteinO.I.H.G.S.X.
0.1112.40.95Ta.3962.3.S1_atBJ256004--3e-1At1g34340esterase/lipase/thioesterase family proteinO.I.H.G.S.X.
0.023.60.93Ta.9621.2.S1_atCK211087--7e+0At5g59470PQ-loop repeat family protein / transmembrane family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
24.999.8GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
6.398.2GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.197.5GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.797.1GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.196.4GSM343688Wheat var. Kennedy_Fp inoculated_rep3GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
4.196.4GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.096.3GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.896.0GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.795.8GSM343682Wheat var. Kennedy_control_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO
3.495.2GSM343687Wheat var. Kennedy_Fp inoculated_rep2GSE13660Gene expression analysis of the wheat response to infection by Fusarium pseudograminearumLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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