Co-expression analysis

Gene ID Ta.29215.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g73650: oxidoreductase, acting on the CH-CH group of donors (HF=5e-5)
Module size 7 genes
NF 0.49
%ile 75.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6081.00.96Ta.29215.1.S1_atCD934480--5e-5At1g73650oxidoreductase, acting on the CH-CH group of donorsO.I.H.G.S.X.
0.6182.00.96Ta.10524.1.S1_atCK162419--1e-8At4g31720TAFII15 (TBP-ASSOCIATED FACTOR II 15)O.I.H.G.S.X.
0.4666.80.96Ta.6595.1.S1_atCA680476--2e+0At5g23035-O.I.H.G.S.X.
0.4464.50.96Ta.7818.1.S1_atCA648774--8e-10At5g47390myb family transcription factorO.I.H.G.S.X.
0.4362.20.97Ta.99.1.S1_atCD866760O-acetylserine (thiol) lyase-5e-18At4g14880OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1)O.I.H.G.S.X.
0.4058.40.96Ta.99.1.S1_x_atCD866760O-acetylserine (thiol) lyase-5e-18At4g14880OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1)O.I.H.G.S.X.
0.3549.80.96TaAffx.97229.1.S1_atAJ613263--1e-3At3g27300G6PD5 (glucose-6-phosphate dehydrogenase 5)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.499.6GSM314252tissue type: germinating seed, coleoptile - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
14.199.5GSM314251tissue type: germinating seed, coleoptile - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
13.599.5GSM314253tissue type: germinating seed, coleoptile - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
5.697.8GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.397.6GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.197.5GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.897.2GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.797.1GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.697.0GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.596.9GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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