Co-expression analysis

Gene ID	Ta.28892.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At2g25070: protein phosphatase 2C, putative / PP2C, putative (HF=2e-11)
Module size	6 genes
NF	0.09
%ile	20.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.0	0.93	Ta.28892.1.S1_s_at	CK198796	-	-	2e-11	At2g25070	protein phosphatase 2C, putative / PP2C, putative	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.94	Ta.28853.1.S1_at	CK195774	-	-	2e+0	At4g11880	AGL14 (agamous-like 14)	O.I.	H.G.	S.X.	Please select
0.16	18.2	0.94	Ta.28853.1.S1_x_at	CK195774	-	-	2e+0	At4g11880	AGL14 (agamous-like 14)	O.I.	H.G.	S.X.	Please select
0.12	13.3	0.95	Ta.9705.1.S1_at	CK152157	-	-	2e-1	At1g04130	tetratricopeptide repeat (TPR)-containing protein	O.I.	H.G.	S.X.	Please select
0.07	8.6	0.94	TaAffx.18912.1.A1_s_at	BJ262315	-	-	3e+0	At4g34070	calcium ion binding	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.94	Ta.4970.1.S1_at	BJ269777	-	-	1e+0	At5g62750	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.5	97.8	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.5	97.8	GSM139915	Anther pre-meiosis rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.7	97.1	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.8	96.0	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.8	96.0	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.8	96.0	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.7	95.8	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.6	95.6	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.6	95.6	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.5	95.4	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage