Co-expression analysis

Gene ID Ta.28850.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g09840: CDC48 (CELL DIVISION CYCLE 48) (HF=1e-167)
Module size 7 genes
NF 0.56
%ile 81.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5779.20.98Ta.28850.1.S1_atBJ262711--1e-167At3g09840CDC48 (CELL DIVISION CYCLE 48)O.I.H.G.S.X.
0.7389.10.98Ta.7608.1.S1_x_atCD452795--7e-5At2g17200ubiquitin family proteinO.I.H.G.S.X.
0.6383.10.98Ta.95.1.S1_atM90663.1--4e-32At2g30110ATUBA1O.I.H.G.S.X.
0.5072.40.98Ta.1770.1.S1_a_atCK209608--6e-1At4g32930unknown proteinO.I.H.G.S.X.
0.5072.40.98Ta.9607.1.A1_a_atCA708572--5e+0At5g2451060s acidic ribosomal protein P1, putativeO.I.H.G.S.X.
0.5072.40.98Ta.1905.2.A1_x_atBE446722--2e-9At2g30110ATUBA1O.I.H.G.S.X.
0.3549.80.98Ta.21374.2.S1_atCK208435--8e-66At5g58290RPT3 (REGULATORY PARTICLE TRIPLE-A ATPASE 3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.196.4GSM138146genotype G13 developing seed at 5 days after anthesis, biological rep1GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
3.595.4GSM111208genotype F36 developing seed at 5 days after anthesis, biological rep1GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.294.8GSM111237genotype F38b developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
3.194.5GSM139921Anther diplotene-anaphaseI rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.194.5GSM138161genotype A91 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
3.194.5GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.094.3GSM111215genotype C58 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
2.994.0GSM138183genotype A10 developing seed at 5 days after anthesis, biological rep3GSE5939Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB locationLink to GEO
2.893.6GSM139922Anther telophaseI-telophaseII rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.692.9GSM111179genotype DH95 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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