Co-expression analysis

Gene ID	Ta.28784.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At1g54410: dehydrin family protein (HF=2e-4)
Module size	7 genes
NF	0.33
%ile	53.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.0	0.90	Ta.28784.1.A1_at	U73215.1	-	-	2e-4	At1g54410	dehydrin family protein	O.I.	H.G.	S.X.	Please select
0.42	60.9	0.89	TaAffx.52150.1.S1_at	CA712260	-	-	9e-4	At1g75950	SKP1 (S PHASE KINASE-ASSOCIATED PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.89	Ta.4199.3.S1_at	CA742813	-	-	2e+1	At5g65340	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	39.2	0.89	Ta.24716.2.A1_at	CA644265	-	-	4e+0	At5g53650	unknown protein	O.I.	H.G.	S.X.	Please select
0.24	30.3	0.89	Ta.2522.3.A1_at	BG906221	-	-	8e-1	At1g73210	unknown protein	O.I.	H.G.	S.X.	Please select
0.19	22.4	0.91	Ta.9136.2.S1_at	CA747260	-	-	3e-2	At5g36240	zinc knuckle (CCHC-type) family protein	O.I.	H.G.	S.X.	Please select
0.16	18.2	0.91	TaAffx.84078.1.S1_at	CA662819	-	-	6e+0	At4g30074	LCR19 (Low-molecular-weight cysteine-rich 19)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.9	98.7	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.8	97.9	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
4.7	97.1	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.4	96.8	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.3	96.7	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.8	96.0	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
3.7	95.8	GSM139919	Anther diplotene-anaphaseI rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.6	95.6	GSM314272	tissue type: floral bracts, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
3.4	95.2	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.4	95.2	GSM298069	Leaf tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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