Co-expression analysis

Gene ID	Ta.28766.1.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At4g25820: XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9) (HF=3e-12)
Module size	6 genes
NF	0.61
%ile	86.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.91	Ta.28766.1.S1_x_at	CN011869	-	-	3e-12	At4g25820	XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)	O.I.	H.G.	S.X.	Please select
0.91	98.2	0.89	TaAffx.15847.5.S1_at	CK212850	-	-	3e-1	At5g13870	EXGT-A4 (ENDOXYLOGLUCAN TRANSFERASE A4)	O.I.	H.G.	S.X.	Please select
0.80	92.2	0.90	Ta.24061.1.A1_x_at	CA722804	-	-	2e-5	At5g57560	TCH4 (Touch 4)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.89	Ta.28766.1.S1_at	CN011869	-	-	3e-12	At4g25820	XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.84	Ta.10183.3.S1_at	CA615175	-	-	4e-1	At5g43410	ethylene-responsive factor, putative	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.84	Ta.23421.1.A1_at	BG904697	-	-	2e-1	At3g13480	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.1	99.3	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
9.0	99.0	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
8.4	98.9	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.2	98.8	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
7.9	98.7	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.0	98.5	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
6.5	98.3	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.4	98.2	GSM315202	target strand labeled: Sense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
5.4	97.7	GSM343686	Wheat var. Kennedy_Fp inoculated_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.4	97.7	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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