Co-expression analysis

Gene ID Ta.28757.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g80940: unknown protein (HF=1e+0)
Module size 30 genes
NF 0.32
%ile 51.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.87Ta.28757.2.S1_atBQ609665--1e+0At1g80940unknown proteinO.I.H.G.S.X.
0.4464.50.94Ta.2138.2.S1_atCA632124--1e+0At1g55840SEC14 cytosolic factor (SEC14) / phosphoglyceride transfer proteinO.I.H.G.S.X.
0.4362.20.93TaAffx.58493.1.S1_atCA624026--2e+1At3g02160DNA bindingO.I.H.G.S.X.
0.4159.60.91TaAffx.111642.1.S1_atCA636102--3e-1At1g27710glycine-rich proteinO.I.H.G.S.X.
0.4058.40.91TaAffx.85933.1.S1_atCA618346--4e+0At3g42310unknown proteinO.I.H.G.S.X.
0.4058.40.93Ta.28579.2.S1_atCA611367--4e+0At5g67580TRB2O.I.H.G.S.X.
0.4058.40.92Ta.19361.2.S1_atCA650802--5e-15At4g12650-O.I.H.G.S.X.
0.3956.10.93TaAffx.21728.1.A1_atCA619942--7e-8At4g34270TIP41-like family proteinO.I.H.G.S.X.
0.3956.10.91TaAffx.28245.1.S1_atCA662835--4e+0At2g23321unknown proteinO.I.H.G.S.X.
0.3854.70.92TaAffx.28450.1.S1_atCA660052--4e+0At2g21620RD2O.I.H.G.S.X.
0.3854.70.91TaAffx.112820.3.S1_atCA623506--4e+0At3g07920translation initiation factorO.I.H.G.S.X.
0.3549.80.91TaAffx.108979.1.S1_atCA681631--3e-1At5g03455CDC25O.I.H.G.S.X.
0.3346.90.92TaAffx.112439.1.S1_x_atCA623907--1e+0At4g27310zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.3244.40.91Ta.20873.1.S1_atCA485891--2e-28At4g35830aconitate hydratase, cytoplasmic / citrate hydro-lyase / aconitase (ACO)O.I.H.G.S.X.
0.3244.40.93TaAffx.64914.1.S1_atBJ270115--4e+0At1g51915cryptdin protein-relatedO.I.H.G.S.X.
0.3244.40.91TaAffx.110830.1.S1_atCA653547--8e-2At2g20613unknown proteinO.I.H.G.S.X.
0.3040.90.92TaAffx.13785.2.S1_atCA708591--7e-8At2g34690ACD11 (ACCELERATED CELL DEATH 11)O.I.H.G.S.X.
0.2939.20.93TaAffx.108544.1.S1_atCA663841--1e+1At4g27270quinone reductase family proteinO.I.H.G.S.X.
0.2939.20.91TaAffx.128418.51.A1_atBJ312178--1e+0At1g31270unknown proteinO.I.H.G.S.X.
0.2735.60.92TaAffx.50913.1.S1_atCA733503--2e+1At4g09467-O.I.H.G.S.X.
0.2532.10.92TaAffx.50318.1.S1_atCA742779--3e+0At3g25400-O.I.H.G.S.X.
0.2329.00.93TaAffx.54497.1.S1_atCA680765--4e+0At4g09460ATMYB6O.I.H.G.S.X.
0.2329.00.94TaAffx.34241.2.S1_atCA722326--4e+0At5g51960-O.I.H.G.S.X.
0.2227.10.94TaAffx.57555.1.S1_atCA618738--2e+1At5g67600unknown proteinO.I.H.G.S.X.
0.2227.10.94TaAffx.34241.2.S1_x_atCA722326--4e+0At5g51960-O.I.H.G.S.X.
0.2227.10.94TaAffx.38268.1.A1_atBJ242361--1e+0At1g21326VQ motif-containing proteinO.I.H.G.S.X.
0.1821.00.93Ta.5807.2.S1_atBJ290044--3e+0At5g43410ethylene-responsive factor, putativeO.I.H.G.S.X.
0.1821.00.94TaAffx.111311.1.S1_atCA643595--1e+0At1g61940AtTLP4 (TUBBY LIKE PROTEIN 4)O.I.H.G.S.X.
0.1618.20.92TaAffx.7563.1.S1_atCA656684--1e+1At5g18640lipase class 3 family proteinO.I.H.G.S.X.
0.1618.20.93TaAffx.107008.1.S1_atCA707795--7e-2At2g24940AtMAPR2 (Arabidopsis thaliana membrane-associated progesterone binding protein 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.998.7GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
6.298.1GSM324488Si- B+ rep2GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
5.897.9GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.397.6GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.097.4GSM298092Crown tissue of Solstice at 3 weeks post germinationGSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.997.3GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.997.3GSM324487Si- B+ rep1GSE12936Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildewLink to GEO
4.797.1GSM111233genotype H8 developing seed at 5 days after anthesis, biological rep2GSE4935wheat expression level polymorphism study 39 genotypes 2 biological repsLink to GEO
4.797.1GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.596.9GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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