Co-expression analysis

Gene ID	Ta.28750.2.A1_x_at
Gene name
Homology with Arabidopsis	Similar to At1g79040: PSBR (photosystem II subunit R) (HF=1e+0)
Module size	6 genes
NF	0.71
%ile	93.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	0.89	Ta.28750.2.A1_x_at	BG905748	-	-	1e+0	At1g79040	PSBR (photosystem II subunit R)	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.90	Ta.28750.1.S1_x_at	CD884700	-	-	2e-3	At1g79040	PSBR (photosystem II subunit R)	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.90	Ta.28750.1.S1_at	CD884700	-	-	2e-3	At1g79040	PSBR (photosystem II subunit R)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.95	Ta.787.1.S1_x_at	CD861885	-	-	2e+1	At4g31580	SRZ-22	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.95	Ta.28592.1.S1_x_at	CN013185	-	-	2e+1	At4g31580	SRZ-22	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.96	Ta.28592.1.S1_at	CN013185	-	-	2e+1	At4g31580	SRZ-22	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.2	96.6	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.1	96.4	GSM246391	SB62_Stem_ rep2_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
3.8	96.0	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.7	95.8	GSM246390	SB62_Stem_ rep1_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
3.7	95.8	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.6	95.6	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.5	95.4	GSM246392	SB109_Stem_ rep1_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
3.5	95.4	GSM246394	SB69_Stem_ rep1_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem
3.4	95.2	GSM324492	Si+ B- rep3	GSE12936	Transcriptomic analysis of the effect of silicon on wheat plants infected or uninfected with powdery mildew
3.4	95.2	GSM246396	SB57_Stem_ rep1_at anthesis	GSE9767	Genotypic differences in water soluble carbohydrate metabolism in stem

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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