Co-expression analysis

Gene ID Ta.28724.1.A1_x_at
Gene name
Homology with ArabidopsisSimilar to At3g52630: - (HF=2e+1)
Module size 30 genes
NF 0.36
%ile 58.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7790.80.97Ta.28724.1.A1_x_atCA722351--2e+1At3g52630-O.I.H.G.S.X.
0.5374.90.98TaAffx.6598.1.S1_atCD938071--1e-19At3g07100protein transport protein Sec24, putativeO.I.H.G.S.X.
0.4969.70.97Ta.649.1.S1_atCD492142--9e+0At5g06030self-incompatibility protein-relatedO.I.H.G.S.X.
0.4869.00.97Ta.8924.1.S1_atCK169194--3e-1At3g57410VLN3 (VILLIN 3)O.I.H.G.S.X.
0.4464.50.97Ta.25198.1.S1_x_atCK196324--3e+0At5g20460unknown proteinO.I.H.G.S.X.
0.4260.90.97Ta.24422.1.S1_s_atBJ320530--4e-17At1g54080oligouridylate-binding protein, putativeO.I.H.G.S.X.
0.4159.60.98Ta.2816.2.S1_a_atCA747268--4e+0At4g18650transcription factor-relatedO.I.H.G.S.X.
0.4159.60.98Ta.1714.1.A1_atCK171428--3e-2At4g39190unknown proteinO.I.H.G.S.X.
0.4159.60.97Ta.19468.1.S1_atBJ290822--3e-6At5g58020unknown proteinO.I.H.G.S.X.
0.4058.40.98Ta.26932.1.S1_atBT009239.1--1e-20At3g57650LPAT2O.I.H.G.S.X.
0.3956.10.98Ta.5131.1.S1_atCK171712--8e-2At1g18830transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.3651.90.97Ta.24916.2.S1_atCK164288--4e-4At4g21105cytochrome-c oxidase/ electron carrierO.I.H.G.S.X.
0.3448.10.97Ta.1125.1.S1_a_atCK193664--7e-14At3g11320organic anion transmembrane transporterO.I.H.G.S.X.
0.3448.10.97Ta.8151.1.S1_atBQ804186--3e+0Atmg00890-O.I.H.G.S.X.
0.3448.10.97Ta.7732.1.S1_atCD930151--2e-22At4g35410clathrin adaptor complex small chain family proteinO.I.H.G.S.X.
0.3346.90.97Ta.7977.1.S1_atBT009221.1--1e-30At3g26370unknown proteinO.I.H.G.S.X.
0.3244.40.98Ta.12037.1.S1_atBQ171315--2e-21At1g31780-O.I.H.G.S.X.
0.3142.70.98Ta.497.1.S1_x_atCK156533--1e-13At3g23660transport protein, putativeO.I.H.G.S.X.
0.3142.70.97Ta.4549.1.S1_atBQ803271--9e-1At1g66420transcription regulatorO.I.H.G.S.X.
0.3040.90.98Ta.8374.1.S1_atBQ161807--7e-24At2g05170ATVPS11O.I.H.G.S.X.
0.2939.20.97Ta.5506.1.S1_atBQ169896--2e+0At2g06570unknown proteinO.I.H.G.S.X.
0.2939.20.98Ta.4538.1.S1_atCD918714--2e-4At3g20920translocation protein-relatedO.I.H.G.S.X.
0.2939.20.97Ta.9072.1.S1_atCK195826--4e-19At4g34110PAB2 (POLY(A) BINDING 2)O.I.H.G.S.X.
0.2839.20.98Ta.14480.2.S1_atBU099921--3e-28At2g33040ATP synthase gamma chain, mitochondrial (ATPC)O.I.H.G.S.X.
0.2839.20.98Ta.28742.4.S1_x_atBJ286746--1e-82At2g36530LOS2O.I.H.G.S.X.
0.2735.60.98Ta.23107.1.S1_a_atCK156982--1e-51At3g53610ATRAB8O.I.H.G.S.X.
0.2735.60.98Ta.1053.2.S1_x_atCA686041--1e-4At1g65930isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putativeO.I.H.G.S.X.
0.2633.60.98Ta.7164.1.S1_atBJ229457--8e-68At3g62560GTP-binding protein, putativeO.I.H.G.S.X.
0.2329.00.98Ta.3851.2.A1_atBJ256928--1e-9At5g10980histone H3O.I.H.G.S.X.
0.1821.00.98Ta.20762.1.S1_s_atCF133661--6e-11At4g28470RPN1B (26S PROTEASOME REGULATORY SUBUNIT S2 1B)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.897.2GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.697.0GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.596.9GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.196.4GSM314288tissue type: 22 DAP endosperm - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.096.3GSM314289tissue type: 22 DAP endosperm - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.595.4GSM314287tissue type: 22 DAP endosperm - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.495.2GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.294.8GSM139918Anther leptotene-pachytene rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.194.5GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.094.3GSM139929Anther immature pollen rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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