Co-expression analysis

Gene ID	Ta.28600.3.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At3g45010: scpl48 (serine carboxypeptidase-like 48) (HF=4e-9)
Module size	7 genes
NF	0.64
%ile	88.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	89.1	0.95	Ta.28600.3.S1_x_at	CA641063	-	-	4e-9	At3g45010	scpl48 (serine carboxypeptidase-like 48)	O.I.	H.G.	S.X.	Please select
0.61	82.0	0.97	Ta.28600.1.S1_a_at	BE443069	-	-	2e-9	At3g45010	scpl48 (serine carboxypeptidase-like 48)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.96	TaAffx.37775.1.A1_s_at	BJ266103	-	-	1e+0	At4g19200	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.97	Ta.28600.2.S1_at	CA720107	-	-	1e-7	At3g45010	scpl48 (serine carboxypeptidase-like 48)	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.97	Ta.28600.1.S1_at	BE443069	-	-	2e-9	At3g45010	scpl48 (serine carboxypeptidase-like 48)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.96	Ta.16251.2.S1_x_at	CA603407	-	-	7e+0	At5g56070	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.96	Ta.16251.3.S1_x_at	CA733104	-	-	8e-1	At5g48335	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.7	97.1	GSM138153	genotype G32 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.7	97.1	GSM138169	genotype B68 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.4	96.8	GSM138184	genotype C25 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.3	96.7	GSM138175	genotype A81 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.2	96.6	GSM138149	genotype F29 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.6	95.6	GSM138162	genotype E5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.6	95.6	GSM138178	genotype A88 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.5	95.4	GSM138181	genotype A35 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.3	95.0	GSM138188	genotype F38a developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.1	94.5	GSM138204	genotype H8 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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