Co-expression analysis

Gene ID	Ta.2847.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g26780: AR192 (HF=7e-1)
Module size	6 genes
NF	0.55
%ile	81.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.44	64.5	0.98	Ta.2847.1.S1_at	CK198392	-	-	7e-1	At4g26780	AR192	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.98	Ta.2363.2.S1_a_at	CA639571	-	-	2e-2	At3g44330	-	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.98	Ta.14476.3.A1_a_at	CK205268	-	-	1e+0	At1g33920	ATPP2-A4 (Phloem protein 2-A4)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.98	Ta.14476.1.S1_x_at	CK154833	-	-	9e-25	At1g47640	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.98	Ta.14560.1.S1_at	BJ274621	-	-	2e-40	At5g63400	ADK1 (ADENYLATE KINASE 1)	O.I.	H.G.	S.X.	Please select
0.35	49.8	0.98	Ta.28313.1.S1_at	BJ293939	-	-	1e-2	At2g21160	translocon-associated protein alpha (TRAP alpha) family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
22.4	99.8	GSM314288	tissue type: 22 DAP endosperm - rep2	GSE12508	Transcription patterns during wheat development
20.1	99.7	GSM314289	tissue type: 22 DAP endosperm - rep3	GSE12508	Transcription patterns during wheat development
19.6	99.7	GSM314287	tissue type: 22 DAP endosperm - rep1	GSE12508	Transcription patterns during wheat development
9.9	99.1	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.2	98.8	GSM343678	Wheat var. Kennedy_control_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.0	98.8	GSM343687	Wheat var. Kennedy_Fp inoculated_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
8.0	98.8	GSM343685	Wheat var. Kennedy_control_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
7.6	98.7	GSM343682	Wheat var. Kennedy_control_rep2	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
5.7	97.9	GSM343686	Wheat var. Kennedy_Fp inoculated_rep1	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.0	96.3	GSM314266	tissue type: seedling, leaf - rep1	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

Back to the CoP portal site

Back to the KAGIANA project homepage