Co-expression analysis

Gene ID	Ta.2840.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g58007: unknown protein (HF=4e+0)
Module size	6 genes
NF	0.55
%ile	81.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	0.97	Ta.2840.1.S1_at	BJ311413	-	-	4e+0	At1g58007	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.96	Ta.5845.2.A1_at	CK208140	-	-	5e+0	Atmg01220	-	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	Ta.7648.1.A1_at	BJ319648	-	-	2e+0	At4g00810	60S acidic ribosomal protein P1 (RPP1B)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.98	Ta.28733.1.S1_at	CN012778	high mobility group protein-like	-	6e-4	At5g59370	ACT4 (ACTIN 4)	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.98	Ta.9218.1.A1_at	BQ170512	-	-	1e-1	At1g09320	agenet domain-containing protein	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.97	Ta.11895.1.S1_at	BQ171007	-	-	4e-6	At1g25280	AtTLP10 (TUBBY LIKE PROTEIN 10)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.7	97.9	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
5.1	97.5	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
4.7	97.1	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
4.1	96.4	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.1	96.4	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
4.0	96.3	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.5	95.4	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
3.5	95.4	GSM139918	Anther leptotene-pachytene rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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