Co-expression analysis

Gene ID	Ta.28384.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g45810: CIPK19 (CBL-INTERACTING PROTEIN KINASE 19) (HF=1e-2)
Module size	22 genes
NF	0.56
%ile	82.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.89	94.6	0.92	Ta.28384.1.S1_at	CA735041	-	-	1e-2	At5g45810	CIPK19 (CBL-INTERACTING PROTEIN KINASE 19)	O.I.	H.G.	S.X.	Please select
0.84	93.6	0.95	Ta.12423.1.A1_at	BG907160	-	-	1e+0	At5g26805	unknown protein	O.I.	H.G.	S.X.	Please select
0.83	93.4	0.95	Ta.7246.1.S1_at	BJ215176	-	-	3e-16	At2g19860	HXK2 (HEXOKINASE 2)	O.I.	H.G.	S.X.	Please select
0.81	92.4	0.95	Ta.586.1.S1_at	BE489131	-	-	3e+0	At1g07790	HTB1	O.I.	H.G.	S.X.	Please select
0.64	83.6	0.96	Ta.23227.2.S1_x_at	CA499786	-	-	2e+0	At5g10390	histone H3	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.95	Ta.28384.1.S1_s_at	CA735041	-	-	1e-2	At5g45810	CIPK19 (CBL-INTERACTING PROTEIN KINASE 19)	O.I.	H.G.	S.X.	Please select
0.62	82.3	0.96	Ta.1062.1.S1_at	CA613133	-	-	1e-6	At4g00490	BAM2 (BETA-AMYLASE 2)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.97	Ta.8328.1.A1_at	BQ161745	-	-	9e-2	At5g09978	PEP7 (ELICITOR PEPTIDE 7 PRECURSOR)	O.I.	H.G.	S.X.	Please select
0.59	79.8	0.95	TaAffx.16921.1.S1_at	CK207650	-	-	5e+0	At2g12405	unknown protein	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.95	Ta.6278.1.A1_at	CD936798	-	-	2e+0	At2g28630	KCS12 (3-KETOACYL-COA SYNTHASE 12)	O.I.	H.G.	S.X.	Please select
0.56	78.6	0.95	Ta.11105.1.S1_at	BQ807137	-	-	7e-10	At1g54450	calcium-binding EF-hand family protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.96	TaAffx.28919.1.S1_at	BJ249313	-	-	2e+0	At5g66090	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.96	Ta.3824.1.A1_x_at	CK205215	-	-	6e+0	At2g04900	unknown protein	O.I.	H.G.	S.X.	Please select
0.54	75.5	0.95	Ta.10608.1.A1_at	BQ166102	-	-	3e+0	At1g67600	-	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.95	TaAffx.3425.1.S1_at	BJ306475	-	-	2e+0	At5g47310	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.96	Ta.30901.1.S1_at	CN012647	-	-	1e+0	At3g43260	-	O.I.	H.G.	S.X.	Please select
0.49	69.7	0.95	Ta.25979.1.A1_s_at	CD454189	-	-	4e+0	At5g26890	unknown protein	O.I.	H.G.	S.X.	Please select
0.47	67.9	0.95	Ta.12296.1.A1_at	BQ172036	-	-	4e+0	At1g31140	agl63 (AGAMOUS-LIKE 63)	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.95	Ta.329.1.A1_s_at	BF484004	-	-	4e+0	At1g53625	unknown protein	O.I.	H.G.	S.X.	Please select
0.42	60.9	0.96	Ta.3824.2.S1_a_at	BJ251897	-	-	2e+0	At3g24500	MBF1C (MULTIPROTEIN BRIDGING FACTOR 1C)	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.95	TaAffx.53053.1.S1_at	CA697147	-	-	2e+1	Atmg00640	-	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.95	TaAffx.9579.1.S1_at	CA594500	-	-	4e+0	At2g39560	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.2	99.5	GSM139933	Anther mature anthers rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
11.7	99.3	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
10.8	99.2	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.4	98.6	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
6.2	98.1	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
5.8	97.9	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.0	96.3	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.9	96.1	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.8	96.0	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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