Co-expression analysis

Gene ID	Ta.28206.3.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At3g02220: unknown protein (HF=2e-2)
Module size	6 genes
NF	0.67
%ile	91.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.97	Ta.28206.3.S1_a_at	CA661286	-	-	2e-2	At3g02220	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.97	Ta.9785.1.S1_a_at	CD893368	-	-	5e+0	At5g16950	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.97	Ta.8142.1.S1_at	BQ752849	-	-	3e-15	At1g61620	phosphoinositide binding	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.97	Ta.5442.3.S1_a_at	CA598439	-	-	7e-2	At2g30260	U2B'' (U2 small nuclear ribonucleoprotein B)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.97	Ta.5442.3.S1_x_at	CA598439	-	-	7e-2	At2g30260	U2B'' (U2 small nuclear ribonucleoprotein B)	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.97	Ta.7506.2.S1_a_at	BJ267303	-	-	5e-15	At1g27650	ATU2AF35A	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.5	97.8	GSM298062	Crown tissue of Harnesk at 5 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.1	97.5	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.1	97.5	GSM298064	Crown tissue of Harnesk at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.9	97.3	GSM298061	Crown tissue of Harnesk at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.4	96.8	GSM298063	Crown tissue of Harnesk at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.3	96.7	GSM314258	tissue type: germinating seed, embryo - rep2	GSE12508	Transcription patterns during wheat development
4.2	96.6	GSM298059	Crown tissue of Harnesk at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.2	96.6	GSM298073	Crown tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
4.1	96.4	GSM298072	Crown tissue of Paragon at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM298060	Crown tissue of Harnesk at 3 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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