Co-expression analysis

Gene ID Ta.28203.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g04640: LIP2 (LIPOYLTRANSFERASE 2) (HF=1e+0)
Module size 7 genes
NF 0.32
%ile 51.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8092.20.98Ta.28203.1.S1_atBG262830--1e+0At1g04640LIP2 (LIPOYLTRANSFERASE 2)O.I.H.G.S.X.
0.4666.80.98TaAffx.3984.1.S1_atCD938015--7e+0At5g56840DNA-binding family proteinO.I.H.G.S.X.
0.3040.90.98Ta.6487.1.A1_atCA659409--1e-7At3g01890SWIB complex BAF60b domain-containing proteinO.I.H.G.S.X.
0.2532.10.98Ta.6624.1.S1_a_atCK208299--4e-4At2g29530mitochondrial import inner membrane translocase (TIM10)O.I.H.G.S.X.
0.2532.10.98Ta.3102.1.A1_atBQ170880--2e+0At5g67480BT4 (BTB AND TAZ DOMAIN PROTEIN 4)O.I.H.G.S.X.
0.1719.80.98Ta.2358.3.S1_x_atCA627906--2e+0At1g15385unknown proteinO.I.H.G.S.X.
0.1517.10.98Ta.2358.3.S1_atCA627906--2e+0At1g15385unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.098.0GSM298079Leaf tissue of Solstice at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.897.2GSM298080Leaf tissue of Solstice at 5 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.296.6GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.795.8GSM143492Jupateco_Lr34 (resistant), mock inoculated basal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.495.2GSM250896Tc_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.395.0GSM143496Jupateco_Lr34 (susceptible), mock inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.294.8GSM139915Anther pre-meiosis rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.294.8GSM143491Jupateco_Lr34 (resistant), mock inoculated basal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
2.994.0GSM139912Anther pre-meiosis rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
2.793.3GSM143490Jupateco_Lr34 (resistant), mock inoculated basal leaf, replication 1GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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