Co-expression analysis

Gene ID	Ta.2818.1.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At1g53260: unknown protein (HF=6e-1)
Module size	6 genes
NF	0.28
%ile	46.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	74.9	0.96	Ta.2818.1.S1_x_at	BJ319737	-	-	6e-1	At1g53260	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.95	Ta.10553.1.A1_at	BQ165977	-	-	9e+0	At5g61540	L-asparaginase, putative / L-asparagine amidohydrolase, putative	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.96	Ta.9126.1.A1_at	BJ323019	-	-	3e-1	At4g18501	unknown protein	O.I.	H.G.	S.X.	Please select
0.22	27.1	0.96	Ta.25949.1.S1_a_at	CD454725	-	-	6e+0	At5g52830	WRKY27	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.96	Ta.4995.2.S1_x_at	CA736274	-	-	6e-1	At3g06730	thioredoxin family protein	O.I.	H.G.	S.X.	Please select
0.11	12.4	0.95	Ta.1855.1.A1_at	BE446122	-	-	5e+0	At5g39600	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
6.1	98.1	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.8	97.2	GSM138163	genotype E5 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.0	96.3	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.9	96.1	GSM138210	genotype B65 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.8	96.0	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
3.6	95.6	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
3.6	95.6	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.5	95.4	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.5	95.4	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.3	95.0	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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