Co-expression analysis

Gene ID	Ta.28170.1.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At4g36750: quinone reductase family protein (HF=3e-1)
Module size	6 genes
NF	0.67
%ile	91.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	89.1	0.98	Ta.28170.1.S1_x_at	CA722194	-	-	3e-1	At4g36750	quinone reductase family protein	O.I.	H.G.	S.X.	Please select
0.71	88.0	0.98	Ta.28170.2.S1_x_at	BJ281672	-	-	4e-1	At4g36750	quinone reductase family protein	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.99	Ta.13276.1.S1_at	CD916692	-	-	8e-9	At4g34700	complex 1 family protein / LVR family protein	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.98	Ta.28170.1.S1_s_at	CA722194	-	-	3e-1	At4g36750	quinone reductase family protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.99	Ta.3169.1.S1_x_at	CD938596	-	-	2e+0	At3g18410	NADH-ubiquinone oxidoreductase-related	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.98	Ta.2598.1.S1_at	BJ238724	Mitochondrial ATP synthase precursor	-	8e-7	At2g21870	unknown protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.8	99.2	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
10.0	99.1	GSM139933	Anther mature anthers rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.8	98.9	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
8.6	98.9	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.0	98.8	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
7.5	98.6	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
6.4	98.2	GSM138207	genotype B11 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
3.3	95.0	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
3.1	94.5	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
2.9	94.0	GSM138154	genotype H5 developing seed at 5 days after anthesis, biological rep1	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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