Co-expression analysis

Gene ID	Ta.28109.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At4g23430: short-chain dehydrogenase/reductase (SDR) family protein (HF=8e-2)
Module size	6 genes
NF	0.58
%ile	84.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.90	Ta.28109.1.A1_at	CA617283	-	-	8e-2	At4g23430	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.57	79.2	0.90	Ta.12323.1.A1_at	BQ172096	-	-	6e+0	Atcg00050	-	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.92	Ta.4018.1.S1_at	CD888469	-	-	7e-4	At2g37540	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.95	Ta.17243.1.S1_at	CA619044	-	-	5e+0	At4g09460	ATMYB6	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.95	Ta.11835.1.A1_at	BQ170901	-	-	3e+0	At1g35030	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.95	Ta.2925.1.S1_s_at	BJ277030	-	-	3e-15	At4g11820	MVA1	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.5	99.4	GSM139933	Anther mature anthers rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
10.9	99.3	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
10.9	99.3	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.6	98.9	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
8.5	98.9	GSM250895	Tc_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
7.3	98.6	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
6.6	98.3	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
5.6	97.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.4	97.7	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.4	96.8	GSM250897	TcLr1_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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