Co-expression analysis

Gene ID Ta.28109.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At4g23430: short-chain dehydrogenase/reductase (SDR) family protein (HF=8e-2)
Module size 6 genes
NF 0.58
%ile 84.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6786.30.90Ta.28109.1.A1_atCA617283--8e-2At4g23430short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.5779.20.90Ta.12323.1.A1_atBQ172096--6e+0Atcg00050-O.I.H.G.S.X.
0.5072.40.92Ta.4018.1.S1_atCD888469--7e-4At2g37540short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.4464.50.95Ta.17243.1.S1_atCA619044--5e+0At4g09460ATMYB6O.I.H.G.S.X.
0.4464.50.95Ta.11835.1.A1_atBQ170901--3e+0At1g35030unknown proteinO.I.H.G.S.X.
0.4464.50.95Ta.2925.1.S1_s_atBJ277030--3e-15At4g11820MVA1O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.599.4GSM139933Anther mature anthers rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
10.999.3GSM139932Anther mature anthers rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
10.999.3GSM139931Anther maturea nthers rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
8.698.9GSM314278tissue type: anthers, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
8.598.9GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
7.398.6GSM314280tissue type: anthers, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
6.698.3GSM314279tissue type: anthers, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.697.8GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.497.7GSM250899TcLr34_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.496.8GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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