Co-expression analysis

Gene ID	Ta.2803.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g46030: unknown protein (HF=1e+0)
Module size	6 genes
NF	0.50
%ile	76.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	83.1	0.98	Ta.2803.1.S1_at	BJ322551	-	-	1e+0	At5g46030	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.98	Ta.6268.1.A1_at	BJ306810	-	-	8e-2	At4g32551	LUG (LEUNIG)	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.98	Ta.13272.1.A1_s_at	CD885703	-	-	6e+0	At4g08790	nitrilase, putative	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.98	Ta.4661.1.S1_s_at	BG314545	-	-	2e-27	At5g47010	LBA1 (LOW-LEVEL BETA-AMYLASE 1)	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.98	Ta.3352.1.S1_at	CK206169	-	-	2e-52	At5g64270	splicing factor, putative	O.I.	H.G.	S.X.	Please select
0.27	35.6	0.98	Ta.1143.1.S1_at	BF473597	-	-	1e-13	At1g64550	ATGCN3	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.2	96.6	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.0	96.3	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.9	96.1	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.9	96.1	GSM139921	Anther diplotene-anaphaseI rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.8	96.0	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.8	96.0	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.7	95.8	GSM139924	Anther telophaseI-telophaseII rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.7	95.8	GSM139920	Anther diplotene-anaphaseI rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.5	95.4	GSM139917	Anther leptotene-pachytene rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.4	95.2	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

A co-expression module including the barley gene, Contig7258_at, orthologous to the query gene, Ta.2803.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.77	90.8	Contig7258_at	At5g46030	-	-	5e+0	At5g46030	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	66.9	Contig723_at	At5g46030	-	-	8e-14	At2g19750	40S ribosomal protein S30 (RPS30A)	O.I.	H.G.	S.X.	Please select
0.43	56.4	rbaal31m19_s_at	At5g46030	-	-	2e+0	At5g21110	unknown protein	O.I.	H.G.	S.X.	Please select
0.39	50.5	Contig8625_at	At5g46030	-	-	2e-1	At3g04880	DRT102 (DNA-DAMAGE-REPAIR/TOLERATION 2)	O.I.	H.G.	S.X.	Please select
0.33	42.6	Contig11298_at	At5g46030	-	-	1e-4	At1g02880	TPK1 (THIAMIN PYROPHOSPHOKINASE1)	O.I.	H.G.	S.X.	Please select
0.27	32.1	Contig4025_x_at	At5g46030	-	-	1e-4	At1g62180	APR2 (5'ADENYLYLPHOSPHOSULFATE REDUCTASE 2)	O.I.	H.G.	S.X.	Please select
0.20	21.1	Contig23054_at	At5g46030	-	-	2e-1	At1g28100	unknown protein	O.I.	H.G.	S.X.	Please select

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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