Co-expression analysis

Gene ID Ta.2803.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g46030: unknown protein (HF=1e+0)
Module size 6 genes
NF 0.50
%ile 76.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6383.10.98Ta.2803.1.S1_atBJ322551--1e+0At5g46030unknown proteinO.I.H.G.S.X.
0.6081.00.98Ta.6268.1.A1_atBJ306810--8e-2At4g32551LUG (LEUNIG)O.I.H.G.S.X.
0.5576.80.98Ta.13272.1.A1_s_atCD885703--6e+0At4g08790nitrilase, putativeO.I.H.G.S.X.
0.4464.50.98Ta.4661.1.S1_s_atBG314545--2e-27At5g47010LBA1 (LOW-LEVEL BETA-AMYLASE 1)O.I.H.G.S.X.
0.4058.40.98Ta.3352.1.S1_atCK206169--2e-52At5g64270splicing factor, putativeO.I.H.G.S.X.
0.2735.60.98Ta.1143.1.S1_atBF473597--1e-13At1g64550ATGCN3O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.296.6GSM139923Anther telophaseI-telophaseII rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.096.3GSM139922Anther telophaseI-telophaseII rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.996.1GSM139925Anther tetrads rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.996.1GSM139921Anther diplotene-anaphaseI rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.896.0GSM139914Anther pre-meiosis rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.896.0GSM139927Anther tetrads rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.795.8GSM139924Anther telophaseI-telophaseII rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.795.8GSM139920Anther diplotene-anaphaseI rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.595.4GSM139917Anther leptotene-pachytene rep2GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.495.2GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At5g46030, orthologous to the query gene, Ta.2803.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.O.I.H.G.S.X.Other DB
0.5873.8At5g46030834644unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVBAO.I.H.G.S.X.
0.5368.6At2g38130818391ATMAK3Encodes the Arabidopsis homolog of the yeast protein MAK3, a component of the N-terminal acetyltransferase complex C. In mutant plants, synthesis of plastome-encoded photosystem II core proteins D1 and CP47 is affected resulting in fewer thylakoid multiprotein complexes.O.I.H.G.S.X.
0.4963.5At5g53560835438CB5-E (CYTOCHROME B5 ISOFORM E)Encodes a cytochrome b5 isoform that can be reduced by AtCBR, a cytochrome b5 reductase.O.I.H.G.S.X.
0.4457.2At1g27530839644-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPO.I.H.G.S.X.
0.4355.3At1g26550839195peptidyl-prolyl cis-trans isomerase PPIC-type family proteinF:isomerase activity;P:biological_process unknown;C:cellular_component unknown;BOMFPAO.I.H.G.S.X.
0.4253.9At1g10590837601DNA-binding protein-relatedF:nucleic acid binding;P:biological_process unknown;C:plasma membrane;PAOO.I.H.G.S.X.
0.4050.8At3g51100824274unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.
0.3745.0At2g44525819060unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;BMOFPO.I.H.G.S.X.
0.3643.6At3g03100821104NADH:ubiquinone oxidoreductase family proteinF:electron carrier activity, oxidoreductase activity, NADH dehydrogenase (ubiquinone) activity;P:unknown;C:mitochondrion, respiratory chain complex I;OBMFPO.I.H.G.S.X.
0.3541.6At3g18430821372calcium-binding EF hand family proteinF:calcium ion binding;P:N-terminal protein myristoylation;C:vacuole;MPOFBO.I.H.G.S.X.
0.3235.7At1g04750839419VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721)vesicle-associated membrane protein 7B (At VAMP7B) mRNA,O.I.H.G.S.X.
0.3133.8At5g51510835225unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POO.I.H.G.S.X.
0.3032.1At5g58740835988nuclear movement family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFO.I.H.G.S.X.
0.2830.3At1g16890838260ubiquitin-conjugating enzyme, putativeUBC36/UBC13B encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair. It can bind to the MMZ/UEV1 proteins in vitro.O.I.H.G.S.X.
0.2624.4At2g01060814630myb family transcription factorF:transcription factor activity;P:regulation of transcription;C:unknown;POBO.I.H.G.S.X.
0.2522.6At1g20575838646dolichyl-phosphate beta-D-mannosyltransferase, putative / dolichol-phosphate mannosyltransferase, putative / mannose-P-dolichol synthase, putativeF:elongation factor-2 kinase activity, dolichyl-phosphate beta-D-mannosyltransferase activity;P:protein amino acid glycosylation;C:endoplasmic reticulum;BOAMFPVO.I.H.G.S.X.
0.2319.3At1g61150842408-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.H.G.S.X.
0.2217.5At2g25280817066-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BAMOFPO.I.H.G.S.X.
0.2217.5At2g17390816246AKR2B (ANKYRIN REPEAT-CONTAINING 2B)Highly homologous to AKR2A. Involved in chloroplast biogenesis. Double mutants of AKR2A and AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.O.I.H.G.S.X.
0.2014.4At4g37830829939cytochrome c oxidase-relatedF:cytochrome-c oxidase activity;P:unknown;C:mitochondrion;MPOO.I.H.G.S.X.
0.1912.7At4g34700829622complex 1 family protein / LVR family proteinF:catalytic activity;P:photorespiration;C:mitochondrial membrane, plasma membrane, respiratory chain complex I;MFPOO.I.H.G.S.X.
0.1912.7At3g15660820809GRX4 (GLUTAREDOXIN 4)F:metal ion binding;P:cell redox homeostasis;C:mitochondrion;OBMPFAO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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