Co-expression analysis

Gene ID	Ta.27728.1.S1_at
Gene name	triose phosphate translocator
Homology with Arabidopsis	Similar to At5g46110: APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2) (HF=3e-22)
Module size	18 genes
NF	0.72
%ile	93.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.75	89.8	0.96	Ta.27728.1.S1_at	AF314182.2	triose phosphate translocator	-	3e-22	At5g46110	APE2 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2)	O.I.	H.G.	S.X.	Please select
0.87	94.2	0.97	Ta.28361.2.S1_at	CK216267	-	-	8e+0	At4g01150	unknown protein	O.I.	H.G.	S.X.	Please select
0.85	93.8	0.98	Ta.27751.2.S1_x_at	CK214731	-	-	4e-27	At2g34420	LHB1B2	O.I.	H.G.	S.X.	Please select
0.84	93.6	0.98	Ta.28361.2.S1_x_at	CK216267	-	-	8e+0	At4g01150	unknown protein	O.I.	H.G.	S.X.	Please select
0.84	93.6	0.98	Ta.1969.1.S1_a_at	BE216986	-	-	5e-7	At2g20260	PSAE-2 (photosystem I subunit E-2)	O.I.	H.G.	S.X.	Please select
0.81	92.4	0.98	Ta.27751.6.S1_at	BJ286005	-	-	1e-28	At2g34420	LHB1B2	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.98	Ta.24304.2.S1_a_at	CK212788	-	-	3e-1	At1g03130	PSAD-2 (photosystem I subunit D-2)	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.98	Ta.1130.2.S1_x_at	CK212780	-	-	5e-26	At5g54270	LHCB3 (LIGHT-HARVESTING CHLOROPHYLL B-BINDING PROTEIN 3)	O.I.	H.G.	S.X.	Please select
0.75	89.8	0.98	Ta.1130.1.S1_a_at	BG907492	-	-	2e-7	At1g29930	CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.73	89.1	0.98	Ta.506.1.S1_a_at	BJ265323	-	-	6e-48	At4g38970	fructose-bisphosphate aldolase, putative	O.I.	H.G.	S.X.	Please select
0.70	87.2	0.98	Ta.30727.1.S1_at	CD873777	-	-	1e-39	At5g01530	chlorophyll A-B binding protein CP29 (LHCB4)	O.I.	H.G.	S.X.	Please select
0.69	86.9	0.98	Ta.2307.1.S1_at	X15233.1	phosphoglycerate kinase	-	1e-92	At1g56190	phosphoglycerate kinase, putative	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.97	Ta.3581.2.S1_x_at	CA600874	-	-	5e+0	At4g03965	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.64	83.6	0.98	Ta.1130.3.S1_x_at	AJ613398	-	-	3e-33	At5g54270	LHCB3 (LIGHT-HARVESTING CHLOROPHYLL B-BINDING PROTEIN 3)	O.I.	H.G.	S.X.	Please select
0.63	83.1	0.97	Ta.1161.1.S1_at	BJ261576	-	-	4e-2	At2g17240	unknown protein	O.I.	H.G.	S.X.	Please select
0.56	78.6	0.98	Ta.22831.1.S1_at	CK211942	membrane protein-like	-	9e-12	At1g08380	PSAO (photosystem I subunit O)	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.98	Ta.22831.1.S1_x_at	CK211942	membrane protein-like	-	9e-12	At1g08380	PSAO (photosystem I subunit O)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.98	Ta.27793.2.S1_x_at	CK218048	Photosystem II polypeptide	-	1e-1	At1g79040	PSBR (photosystem II subunit R)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
28.7	99.8	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
7.5	98.6	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
4.1	96.4	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.1	96.4	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
2.5	92.5	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
2.5	92.5	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
2.4	92.0	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.4	92.0	GSM298091	Leaf tissue of Solstice at 9 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
2.1	90.3	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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