Co-expression analysis

Gene ID	Ta.27658.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g19450: TAG1 (TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1) (HF=8e-29)
Module size	6 genes
NF	0.15
%ile	28.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.93	Ta.27658.1.S1_at	BT009528.1	-	-	8e-29	At2g19450	TAG1 (TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1)	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.93	TaAffx.37032.1.S1_at	BJ304229	-	-	2e+0	At3g27025	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.93	Ta.5396.2.S1_a_at	BJ287380	-	-	5e+0	At5g48820	ICK6 (INHIBITOR/INTERACTOR WITH CYCLIN-DEPENDENT KINASE)	O.I.	H.G.	S.X.	Please select
0.18	21.0	0.94	Ta.731.1.S1_at	BE516718	-	-	1e-1	At4g28170	unknown protein	O.I.	H.G.	S.X.	Please select
0.13	14.6	0.94	Ta.28535.1.S1_at	BJ289039	-	-	1e+0	At5g55135	unknown protein	O.I.	H.G.	S.X.	Please select
0.06	7.6	0.91	Ta.14499.1.S1_at	BJ298784	-	-	1e+0	At3g50830	COR413-PM2 (COLD-REGULATED 413-PLASMA MEMBRANE 2)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
23.3	99.8	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
16.5	99.6	GSM314286	tissue type: 22 DAP embryo - rep3	GSE12508	Transcription patterns during wheat development
15.3	99.6	GSM314284	tissue type: 22 DAP embryo - rep1	GSE12508	Transcription patterns during wheat development
15.2	99.6	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development
15.0	99.6	GSM314285	tissue type: 22 DAP embryo - rep2	GSE12508	Transcription patterns during wheat development
14.5	99.5	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
9.6	99.1	GSM314289	tissue type: 22 DAP endosperm - rep3	GSE12508	Transcription patterns during wheat development
9.2	99.0	GSM314287	tissue type: 22 DAP endosperm - rep1	GSE12508	Transcription patterns during wheat development
7.4	98.6	GSM314288	tissue type: 22 DAP endosperm - rep2	GSE12508	Transcription patterns during wheat development
3.1	94.5	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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