Co-expression analysis

Gene ID	Ta.27570.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g50660: DWF4 (DWARF 4) (HF=3e-9)
Module size	6 genes
NF	0.15
%ile	27.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.46	66.8	0.85	Ta.27570.1.S1_at	CD899311	-	-	3e-9	At3g50660	DWF4 (DWARF 4)	O.I.	H.G.	S.X.	Please select
0.36	51.9	0.90	Ta.20981.1.S1_at	CA645417	-	-	2e-7	At4g33910	oxidoreductase, 2OG-Fe(II) oxygenase family protein	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.80	Ta.10048.2.S1_at	CA713996	-	-	2e-3	At2g14720	VSR-2	O.I.	H.G.	S.X.	Please select
0.15	17.1	0.85	TaAffx.15828.1.S1_at	BQ803483	-	-	3e+0	At4g19270	unknown protein	O.I.	H.G.	S.X.	Please select
0.08	9.4	0.83	TaAffx.610.1.S1_at	BQ168804	-	-	4e-1	At5g03580	polyadenylate-binding protein, putative / PABP, putative	O.I.	H.G.	S.X.	Please select
0.06	7.6	0.79	Ta.11411.1.A1_at	BQ170044	-	-	4e+0	At1g21010	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
24.8	99.8	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
13.0	99.4	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
12.0	99.4	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
10.1	99.2	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
9.0	99.0	GSM143509	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.1	97.5	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.5	96.9	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.5	96.9	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.3	96.7	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.0	96.3	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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