Co-expression analysis

Gene ID	Ta.27569.1.S1_at
Gene name	MADS-box transcription factor TaAGL35
Homology with Arabidopsis	Similar to At5g51870: AGL71 (AGAMOUS-LIKE 71) (HF=8e-2)
Module size	6 genes
NF	0.29
%ile	47.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.95	Ta.27569.1.S1_at	CD888059	MADS-box transcription factor TaAGL35	-	8e-2	At5g51870	AGL71 (AGAMOUS-LIKE 71)	O.I.	H.G.	S.X.	Please select
0.80	92.2	0.93	Ta.5088.1.S1_at	BJ271615	-	-	1e+0	At3g06750	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.95	TaAffx.121589.1.S1_at	CA703220	-	-	5e+0	At1g63855	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.96	TaAffx.80103.1.S1_at	CA702503	-	-	2e+1	At1g75335	unknown protein	O.I.	H.G.	S.X.	Please select
0.21	25.5	0.95	TaAffx.25001.1.S1_at	CA704216	-	-	2e-1	At4g28730	glutaredoxin family protein	O.I.	H.G.	S.X.	Please select
0.08	9.4	0.95	Ta.24732.1.S1_at	BQ804515	Type 1 non-specific lipid transfer protein precursor	-	2e+1	At4g31290	ChaC-like family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.0	99.3	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
6.7	98.4	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.0	97.4	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
4.7	97.1	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.7	97.1	GSM138207	genotype B11 developing seed at 5 days after anthesis, biological rep3	GSE5939	Wheat expression level polymorphism study 36 genotypes 2 biological reps from SB location
4.6	97.0	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.1	96.4	GSM314282	tissue type: 3-5 DAP caryopsis - rep2	GSE12508	Transcription patterns during wheat development
3.7	95.8	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM250902	Tc_7dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.4	95.2	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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