Co-expression analysis

Gene ID	Ta.2756.1.S1_at
Gene name	high-affinity nitrate transporter
Homology with Arabidopsis	Similar to At1g08090: ATNRT2:1 (NITRATE TRANSPORTER 2:1) (HF=6e-8)
Module size	6 genes
NF	0.32
%ile	52.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.46	66.8	0.86	Ta.2756.1.S1_at	AY053452.1	high-affinity nitrate transporter	-	6e-8	At1g08090	ATNRT2:1 (NITRATE TRANSPORTER 2:1)	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.87	Ta.16683.1.A1_at	CA610934	-	-	5e+0	At1g54217	Expressed protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.85	TaAffx.37332.1.A1_at	BJ285008	-	-	3e-1	At1g02710	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.30	40.9	0.87	Ta.19498.1.S1_at	CA643628	-	-	6e-1	At1g07210	30S ribosomal protein S18 family	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.86	TaAffx.56759.1.S1_at	CA645014	-	-	1e+0	At1g77100	peroxidase, putative	O.I.	H.G.	S.X.	Please select
0.20	24.0	0.87	TaAffx.86455.1.S1_at	CA607691	-	-	4e+0	At3g20970	NFU4	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
20.9	99.7	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
14.3	99.5	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
7.8	98.7	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
6.9	98.4	GSM298067	Leaf tissue of Paragon at 5 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.0	98.0	GSM298070	Leaf tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.8	97.9	GSM250914	Tc_7dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.9	97.3	GSM314259	tissue type: germinating seed, embryo - rep3	GSE12508	Transcription patterns during wheat development
4.2	96.6	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.7	95.8	GSM250902	Tc_7dpi_inoculated_rep1	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.5	95.4	GSM298071	Crown tissue of Paragon at 3 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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