Co-expression analysis

Gene ID	Ta.27512.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At3g42310: unknown protein (HF=2e+0)
Module size	14 genes
NF	0.55
%ile	81.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.96	Ta.27512.1.S1_at	BT009204.1	-	-	2e+0	At3g42310	unknown protein	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.96	Ta.7477.1.S1_at	CK209166	-	-	2e+0	At1g38630	unknown protein	O.I.	H.G.	S.X.	Please select
0.64	83.6	0.97	Ta.30570.1.A1_at	BJ263950	-	-	4e+0	At5g20150	SPX1 (SPX DOMAIN GENE 1)	O.I.	H.G.	S.X.	Please select
0.60	81.0	0.96	Ta.8921.1.A1_at	BQ162637	-	-	3e+0	At1g04230	unknown protein	O.I.	H.G.	S.X.	Please select
0.56	78.6	0.96	Ta.8708.1.A1_at	BQ162257	-	-	3e+0	At2g14692	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.96	Ta.11601.1.A1_at	BQ170431	-	-	3e+0	At3g17460	PHD finger family protein	O.I.	H.G.	S.X.	Please select
0.53	74.9	0.96	Ta.11969.1.A1_a_at	CK208221	-	-	5e+0	At5g58500	LSH5 (LIGHT SENSITIVE HYPOCOTYLS 5)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.96	TaAffx.50804.2.S1_s_at	CA735112	-	-	9e-1	At3g07590	small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	Ta.10234.1.A1_at	CD910254	-	-	2e+0	At2g15710	meprin and TRAF homology domain-containing protein / MATH domain-containing protein	O.I.	H.G.	S.X.	Please select
0.49	69.7	0.96	Ta.7222.1.A1_at	BJ322973	-	-	3e-5	At2g45830	DTA2 (DOWNSTREAM TARGET OF AGL15 2)	O.I.	H.G.	S.X.	Please select
0.45	65.2	0.96	Ta.4891.1.A1_at	CK209693	-	-	7e+0	At3g59455	-	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.96	Ta.23415.1.S1_at	BG907280	-	-	3e+0	At2g25735	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	64.5	0.97	Ta.30930.1.S1_at	BJ312106	-	-	1e+0	At3g05830	-	O.I.	H.G.	S.X.	Please select
0.38	54.7	0.96	Ta.5081.1.A1_at	BJ271506	-	-	1e+0	At5g50740	metal ion binding	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.5	97.8	GSM315203	target strand labeled: Antisense - rep1	GSE12528	Wheat "Chinese Spring" natural antisense transcription survey
4.0	96.3	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.7	95.8	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.4	95.2	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
3.3	95.0	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
3.0	94.3	GSM298092	Crown tissue of Solstice at 3 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
3.0	94.3	GSM139914	Anther pre-meiosis rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.9	94.0	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
2.8	93.6	GSM139922	Anther telophaseI-telophaseII rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.7	93.3	GSM139923	Anther telophaseI-telophaseII rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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