Co-expression analysis

Gene ID	Ta.27457.1.S1_x_at
Gene name
Homology with Arabidopsis	Similar to At3g09390: MT2A (METALLOTHIONEIN 2A) (HF=2e-9)
Module size	6 genes
NF	0.67
%ile	91.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.97	Ta.27457.1.S1_x_at	CD894008	-	-	2e-9	At3g09390	MT2A (METALLOTHIONEIN 2A)	O.I.	H.G.	S.X.	Please select
0.91	98.2	0.94	Ta.27457.7.S1_x_at	CD861404	-	-	2e-9	At3g09390	MT2A (METALLOTHIONEIN 2A)	O.I.	H.G.	S.X.	Please select
0.91	98.2	0.94	Ta.16230.1.S1_x_at	CA602965	-	-	9e+0	At5g67060	HEC1 (HECATE 1)	O.I.	H.G.	S.X.	Please select
0.83	93.4	0.93	TaAffx.106441.1.S1_at	CA718833	-	-	2e+0	At1g17990	12-oxophytodienoate reductase, putative	O.I.	H.G.	S.X.	Please select
0.77	90.8	0.93	Ta.27457.3.S1_x_at	CA729143	-	-	2e-9	At3g09390	MT2A (METALLOTHIONEIN 2A)	O.I.	H.G.	S.X.	Please select
0.23	29.0	0.94	Ta.28629.1.S1_x_at	BE405376	metallothionein-like protein	-	1e+0	At2g42000	plant EC metallothionein-like family 15 protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
16.1	99.6	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
11.5	99.3	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
7.5	98.6	GSM143502	Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
6.6	98.3	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development
6.4	98.2	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
5.9	98.0	GSM143509	Thatcher_Lr34 (resistant), mock inoculated basal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.3	97.6	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
5.3	97.6	GSM143504	Thatcher_Lr34 (resistant), rust inoculated basal leaf, replication 3	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
5.0	97.4	GSM143515	Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 1	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves
4.6	97.0	GSM143516	Thatcher_Lr34 (susceptible), rust inoculated basal leaf, replication 2	GSE6227	Expression data from rust or mock inoculated, fully expanded flag leaf halves

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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