Co-expression analysis

Gene ID	Ta.27312.1.S1_x_at
Gene name	Ammonium transporter
Homology with Arabidopsis	Similar to At4g13510: AMT1 (HF=8e-17)
Module size	6 genes
NF	0.40
%ile	63.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	86.3	0.97	Ta.27312.1.S1_x_at	BT009318.1	Ammonium transporter	-	8e-17	At4g13510	AMT1	O.I.	H.G.	S.X.	Please select
0.55	76.8	0.97	TaAffx.80525.1.A1_at	BG907883	-	-	5e-1	At3g47430	PEX11B	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	Ta.25405.2.S1_a_at	CA742742	-	-	4e-1	At3g17730	anac057 (Arabidopsis NAC domain containing protein 57)	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.97	Ta.21038.1.S1_at	CA601803	Ammonium transporter	-	4e+0	At3g48205	-	O.I.	H.G.	S.X.	Please select
0.24	30.3	0.96	Ta.3910.1.A1_at	BJ255152	-	-	3e+0	At4g33710	pathogenesis-related protein, putative	O.I.	H.G.	S.X.	Please select
0.24	30.3	0.97	Ta.429.1.S1_at	BQ172173	-	-	2e-1	At5g47770	FPS1 (FARNESYL DIPHOSPHATE SYNTHASE 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.3	99.3	GSM298082	Leaf tissue of Solstice at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
11.2	99.3	GSM298081	Leaf tissue of Solstice at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
6.8	98.4	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
5.2	97.5	GSM298090	Leaf tissue of Solstice at 5 weeks post germination	GSE11774	Expression data from cold treated wheat cultivars
5.0	97.4	GSM314273	tissue type: floral bracts, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
4.9	97.3	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.7	97.1	GSM343688	Wheat var. Kennedy_Fp inoculated_rep3	GSE13660	Gene expression analysis of the wheat response to infection by Fusarium pseudograminearum
4.6	97.0	GSM314274	tissue type: floral bracts, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
4.3	96.7	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.9	96.1	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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