Co-expression analysis

Gene ID	Ta.27238.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g19740: peptidase M28 family protein (HF=3e-8)
Module size	6 genes
NF	0.18
%ile	31.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.44	64.5	0.89	Ta.27238.1.S1_at	BT009569.1	-	-	3e-8	At5g19740	peptidase M28 family protein	O.I.	H.G.	S.X.	Please select
0.50	72.4	0.86	Ta.11168.2.A1_at	BQ169546	-	-	1e+0	At1g03470	kinase interacting family protein	O.I.	H.G.	S.X.	Please select
0.40	58.4	0.86	TaAffx.38261.1.A1_at	BJ242785	-	-	6e+0	Atmg00960	-	O.I.	H.G.	S.X.	Please select
0.33	46.9	0.89	TaAffx.36748.1.S1_at	BJ321591	-	-	5e+0	At1g27330	-	O.I.	H.G.	S.X.	Please select
0.16	18.2	0.89	Ta.14289.2.S1_a_at	CA630642	triticain beta /// triticain beta 2	-	2e-2	At1g47128	RD21 (responsive to dehydration 21)	O.I.	H.G.	S.X.	Please select
0.05	6.7	0.86	Ta.6608.1.S1_at	CD453559	-	-	9e+0	At2g36060	ubiquitin-conjugating enzyme family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
26.9	99.8	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
20.8	99.7	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
9.8	99.1	GSM314254	tissue type: germinating seed, root - rep1	GSE12508	Transcription patterns during wheat development
9.2	99.0	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
7.5	98.6	GSM314255	tissue type: germinating seed, root - rep2	GSE12508	Transcription patterns during wheat development
6.1	98.1	GSM298076	Crown tissue of Paragon at 9 weeks post germination, biological rep 2	GSE11774	Expression data from cold treated wheat cultivars
5.8	97.9	GSM298075	Crown tissue of Paragon at 9 weeks post germination, biological rep 1	GSE11774	Expression data from cold treated wheat cultivars
5.1	97.5	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.9	97.3	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
4.6	97.0	GSM314256	tissue type: germinating seed, root - rep3	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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