Co-expression analysis

Gene ID	Ta.2718.2.S1_a_at
Gene name
Homology with Arabidopsis	Similar to At3g53710: AGD6 (HF=9e-9)
Module size	6 genes
NF	0.17
%ile	30.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.48	69.0	0.96	Ta.2718.2.S1_a_at	CK168482	-	-	9e-9	At3g53710	AGD6	O.I.	H.G.	S.X.	Please select
0.17	19.8	0.96	Ta.12251.2.S1_a_at	CA640207	-	-	1e-4	At5g50430	UBC33 (ubiquitin-conjugating enzyme 33)	O.I.	H.G.	S.X.	Please select
0.17	19.8	0.96	Ta.4092.3.S1_a_at	CA641264	-	-	4e+0	At4g08351	unknown protein	O.I.	H.G.	S.X.	Please select
0.13	14.6	0.96	Ta.7027.3.S1_at	CA619777	-	-	1e+0	At5g37770	TCH2 (TOUCH 2)	O.I.	H.G.	S.X.	Please select
0.13	14.6	0.96	Ta.1416.1.S1_at	CD452893	-	-	1e-6	At4g32285	epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related	O.I.	H.G.	S.X.	Please select
0.07	8.6	0.96	TaAffx.105916.1.S1_at	CA691120	-	-	6e-2	At1g02170	AMC1 (METACASPASE 1)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.0	99.4	GSM314277	tissue type: pistil, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
11.0	99.3	GSM314275	tissue type: pistil, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
9.2	99.0	GSM314276	tissue type: pistil, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
6.5	98.3	GSM314269	tissue type: immature inflorescence - rep1	GSE12508	Transcription patterns during wheat development
6.4	98.2	GSM314270	tissue type: immature inflorescence - rep2	GSE12508	Transcription patterns during wheat development
6.2	98.1	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
3.6	95.6	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.2	94.8	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
3.1	94.5	GSM111233	genotype H8 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
3.1	94.5	GSM314271	tissue type: immature inflorescence - rep3	GSE12508	Transcription patterns during wheat development

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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