Co-expression analysis

Gene ID Ta.27101.10.S1_x_at
Gene name
Homology with ArabidopsisSimilar to At5g10980: histone H3 (HF=1e-26)
Module size 10 genes
NF 0.83
%ile 98.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8092.20.99Ta.27101.10.S1_x_atAJ613323--1e-26At5g10980histone H3O.I.H.G.S.X.
0.9599.10.99Ta.1078.2.S1_a_atBJ252383Cyclophilin-8e-6At4g38740ROC1 (ROTAMASE CYP 1)O.I.H.G.S.X.
0.9094.80.99Ta.2502.1.S1_a_atBJ241868HSP80-2-0At5g56000heat shock protein 81-4 (HSP81-4)O.I.H.G.S.X.
0.9094.80.99Ta.5057.3.A1_atCK194001Profilin /// Profilin-2e-12At4g29350PFN2 (PROFILIN 2)O.I.H.G.S.X.
0.8994.60.99Ta.28783.1.S1_x_atU32310.1single-stranded nucleic acid binding protein-5e-4At4g39260GR-RBP8O.I.H.G.S.X.
0.7891.10.99Ta.1342.1.S1_s_atCD933741--6e-9At2g23090unknown proteinO.I.H.G.S.X.
0.7589.80.99Ta.1058.2.S1_x_atBJ254771S-adenosylmethionine decarboxylase precursor-3e-5At3g02470SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE)O.I.H.G.S.X.
0.7589.80.99Ta.1058.2.S1_atBJ254771S-adenosylmethionine decarboxylase precursor-3e-5At3g02470SAMDC (S-ADENOSYLMETHIONINE DECARBOXYLASE)O.I.H.G.S.X.
0.7389.10.99Ta.24977.1.S1_x_atCK205284--5e-67At3g04120GAPC1 (GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1)O.I.H.G.S.X.
0.6081.00.99Ta.14126.1.S1_atBE429982--5e-4At1g15270-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
27.899.8GSM315203target strand labeled: Antisense - rep1GSE12528Wheat "Chinese Spring" natural antisense transcription surveyLink to GEO
6.398.2GSM298069Leaf tissue of Paragon at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.396.7GSM314256tissue type: germinating seed, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.296.6GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.896.0GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.695.6GSM314258tissue type: germinating seed, embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
3.695.6GSM314254tissue type: germinating seed, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
3.595.4GSM298081Leaf tissue of Solstice at 9 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
3.395.0GSM314259tissue type: germinating seed, embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
3.194.5GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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