Co-expression analysis

Gene ID	Ta.27027.1.S1_s_at
Gene name
Homology with Arabidopsis	Similar to At4g22130: SRF8 (STRUBBELIG-RECEPTOR FAMILY 8) (HF=9e-34)
Module size	7 genes
NF	0.77
%ile	96.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	74.9	0.94	Ta.27027.1.S1_s_at	CA596068	-	-	9e-34	At4g22130	SRF8 (STRUBBELIG-RECEPTOR FAMILY 8)	O.I.	H.G.	S.X.	Please select
0.86	94.1	0.92	Ta.5504.2.S1_at	CA629406	-	-	2e+1	At4g24130	unknown protein	O.I.	H.G.	S.X.	Please select
0.83	93.4	0.94	Ta.5504.1.S1_x_at	CK211141	-	-	7e+0	At1g01750	ADF11 (ACTIN DEPOLYMERIZING FACTOR 11)	O.I.	H.G.	S.X.	Please select
0.80	92.2	0.92	Ta.7871.3.S1_a_at	CA636480	-	-	7e-1	At1g70470	unknown protein	O.I.	H.G.	S.X.	Please select
0.80	92.2	0.94	Ta.7871.1.S1_x_at	BQ752923	-	-	1e-39	At2g41540	GPDHC1	O.I.	H.G.	S.X.	Please select
0.67	86.3	0.94	Ta.7871.3.S1_at	CA636480	-	-	7e-1	At1g70470	unknown protein	O.I.	H.G.	S.X.	Please select
0.61	82.0	0.95	Ta.7871.2.S1_a_at	CA708151	-	-	7e-8	At2g41540	GPDHC1	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
22.9	99.8	GSM314261	tissue type: seedling, root - rep2	GSE12508	Transcription patterns during wheat development
18.8	99.7	GSM314262	tissue type: seedling, root - rep3	GSE12508	Transcription patterns during wheat development
11.0	99.3	GSM139928	Anther immature pollen rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
9.8	99.1	GSM139927	Anther tetrads rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
9.3	99.0	GSM139925	Anther tetrads rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
9.2	99.0	GSM314260	tissue type: seedling, root - rep1	GSE12508	Transcription patterns during wheat development
7.3	98.6	GSM139930	Anther immature pollen rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
6.3	98.2	GSM139926	Anther tetrads rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
2.6	92.9	GSM111187	genotype B68 developing seed at 5 days after anthesis, biological rep2	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps
2.3	91.5	GSM111186	genotype B68 developing seed at 5 days after anthesis, biological rep1	GSE4935	wheat expression level polymorphism study 39 genotypes 2 biological reps

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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