Co-expression analysis

Gene ID	Ta.26817.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At4g02570: ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1) (HF=3e-20)
Module size	6 genes
NF	0.04
%ile	11.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.2	0.80	Ta.26817.1.A1_at	CD491320	-	-	3e-20	At4g02570	ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1)	O.I.	H.G.	S.X.	Please select
0.10	11.3	0.96	TaAffx.37204.1.A1_at	BQ168973	-	-	1e+0	At4g05523	-	O.I.	H.G.	S.X.	Please select
0.06	7.6	0.95	Ta.10519.1.S1_at	BQ170270	-	-	9e+0	At3g63490	ribosomal protein L1 family protein	O.I.	H.G.	S.X.	Please select
0.03	4.7	0.97	Ta.6692.1.S1_at	CA741153	-	-	9e-10	At4g36960	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.95	TaAffx.11835.1.A1_at	BJ321178	-	-	3e-1	At4g26940	galactosyltransferase family protein	O.I.	H.G.	S.X.	Please select
0.02	3.6	0.96	Ta.10267.1.A1_at	BJ249543	-	-	1e+1	At2g35035	URED (urease accessory protein D)	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.8	99.5	GSM314280	tissue type: anthers, before anthesis - rep3	GSE12508	Transcription patterns during wheat development
13.3	99.5	GSM314278	tissue type: anthers, before anthesis - rep1	GSE12508	Transcription patterns during wheat development
11.5	99.3	GSM314279	tissue type: anthers, before anthesis - rep2	GSE12508	Transcription patterns during wheat development
8.7	98.9	GSM139932	Anther mature anthers rep2	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
8.2	98.8	GSM139931	Anther maturea nthers rep1	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
7.3	98.6	GSM139933	Anther mature anthers rep3	GSE6027	Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheat
5.5	97.8	GSM250900	TcLr34_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
5.1	97.5	GSM250898	TcLr1_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.3	96.7	GSM250896	Tc_3dpi_inoculated_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat
4.2	96.6	GSM250899	TcLr34_3dpi_mock_rep3	GSE9915	Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheat

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Vitis_vinifera

Zea_mays

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