Co-expression analysis

Gene ID Ta.26746.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At2g45300: 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase (HF=9e-36)
Module size 6 genes
NF 0.10
%ile 21.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.93Ta.26746.1.A1_atCD491034--9e-36At2g453003-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthaseO.I.H.G.S.X.
0.1618.20.97Ta.12687.1.S1_atBJ2642435-enolpyruvylshikimate 3-phosphate synthase-2e-34At1g488603-phosphoshikimate 1-carboxyvinyltransferase, putative / 5-enolpyruvylshikimate-3-phosphate, putative / EPSP synthase, putativeO.I.H.G.S.X.
0.1314.60.97TaAffx.4157.1.S1_atCA608260--4e-3At1g17160pfkB-type carbohydrate kinase family proteinO.I.H.G.S.X.
0.089.40.97Ta.16668.1.S1_x_atCK212492--2e+0At3g54826-O.I.H.G.S.X.
0.067.60.98Ta.14227.1.S1_atCD869993--1e-7At5g35680eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putativeO.I.H.G.S.X.
0.045.80.97Ta.659.6.S1_x_atBJ282457--0At1g07920elongation factor 1-alpha / EF-1-alphaO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.998.0GSM314276tissue type: pistil, before anthesis - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.197.5GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.997.3GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
4.797.1GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.797.1GSM139930Anther immature pollen rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.596.9GSM143522Thatcher_Lr34 (susceptible), mock inoculated basal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
4.496.8GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
4.496.8GSM143519Thatcher_Lr34 (susceptible), rust inoculated distal leaf, replication 2GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
4.196.4GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
3.795.8GSM250898TcLr1_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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