Co-expression analysis

Gene ID Ta.26730.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g22070: unknown protein (HF=5e+0)
Module size 6 genes
NF 0.08
%ile 18.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.76Ta.26730.1.A1_atCD490982--5e+0At5g22070unknown proteinO.I.H.G.S.X.
0.5072.40.97TaAffx.48306.1.S1_atCA599737--3e-5At2g16405transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.4058.40.97Ta.12738.1.S1_atBE493232--1e-14At3g57890tubulin-specific chaperone C-relatedO.I.H.G.S.X.
0.078.60.91Ta.19555.2.S1_x_atCA606092--9e-23At1g80230cytochrome c oxidase family proteinO.I.H.G.S.X.
0.078.60.97Ta.14559.1.S1_x_atCD928218--5e-4At3g03100NADH:ubiquinone oxidoreductase family proteinO.I.H.G.S.X.
0.023.60.95Ta.7650.1.A1_atBJ288960--1e-7At2g47900AtTLP3 (TUBBY LIKE PROTEIN 3)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
33.999.9GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
9.899.1GSM250900TcLr34_3dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
8.698.9GSM314261tissue type: seedling, root - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
8.198.8GSM314262tissue type: seedling, root - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
6.398.2GSM314259tissue type: germinating seed, embryo - rep3GSE12508Transcription patterns during wheat developmentLink to GEO
6.198.1GSM250897TcLr1_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.297.5GSM250895Tc_3dpi_mock_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.097.4GSM314260tissue type: seedling, root - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
5.097.4GSM314252tissue type: germinating seed, coleoptile - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
5.097.4GSM314258tissue type: germinating seed, embryo - rep2GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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