Co-expression analysis

Gene ID Ta.26662.2.A1_x_at
Gene name
Homology with ArabidopsisSimilar to At1g05520: transport protein, putative (HF=2e-5)
Module size 6 genes
NF 0.17
%ile 30.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.20.76Ta.26662.2.A1_x_atCA624367--2e-5At1g05520transport protein, putativeO.I.H.G.S.X.
0.3142.70.98Ta.14579.1.S1_atBJ21726920S proteasome beta 5 subunit-8e-10At3g2634020S proteasome beta subunit E, putativeO.I.H.G.S.X.
0.2939.20.97Ta.22577.1.S1_atCA687418--3e-5At1g11240unknown proteinO.I.H.G.S.X.
0.1314.60.98Ta.29525.1.S1_atCA691279--2e-3At1g79390unknown proteinO.I.H.G.S.X.
0.1011.30.98Ta.6402.1.S1_atCK151576--2e-1At3g45280SYP72 (SYNTAXIN OF PLANTS 72)O.I.H.G.S.X.
0.078.60.98Ta.7043.1.A1_atCB307359--2e+0At3g59470far-red impaired responsive family protein / FAR1 family proteinO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.698.3GSM298070Leaf tissue of Paragon at 9 weeks post germination, biological rep 2GSE11774Expression data from cold treated wheat cultivarsLink to GEO
6.398.2GSM250914Tc_7dpi_inoculated_rep3GSE9915Transcript profiling of Lr1- and Lr34-mediated leaf rust resistance in wheatLink to GEO
5.097.4GSM314275tissue type: pistil, before anthesis - rep1GSE12508Transcription patterns during wheat developmentLink to GEO
4.596.9GSM139928Anther immature pollen rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.596.9GSM139927Anther tetrads rep3GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
4.296.6GSM314270tissue type: immature inflorescence - rep2GSE12508Transcription patterns during wheat developmentLink to GEO
4.296.6GSM298067Leaf tissue of Paragon at 5 weeks post germination, biological rep 1GSE11774Expression data from cold treated wheat cultivarsLink to GEO
4.096.3GSM143507Thatcher_Lr34 (resistant), rust inoculated distal leaf, replication 3GSE6227Expression data from rust or mock inoculated, fully expanded flag leaf halvesLink to GEO
3.996.1GSM139925Anther tetrads rep1GSE6027Microarray expression analysis of meiosis and microsporogenesis in hexaploid bread wheatLink to GEO
3.896.0GSM314277tissue type: pistil, before anthesis - rep3GSE12508Transcription patterns during wheat developmentLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera
Zea_mays



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